Evidence map›Paper›PMID 32477645›Full record

ArticleAMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science2020

PDC - a probabilistic distributional clustering algorithm: a case study on suicide articles in PubMed.

Rezarta Islamaj, Lana Yeganova, Won Kim, Natalie Xie, W John Wilbur, Zhiyong Lu

Open access · greenAbstract read
In one paragraph

Article in AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 0 citations in OpenAlex.

  1. Article
  2. Article
  3. PDC - a probabilistic distributional clustering algorithm: a case study on suicide articles in PubMed.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Rezarta IslamajNational Library of Medicine, National Institutes of Health, Bethesda MD, USA.
Lana YeganovaNational Library of Medicine, National Institutes of Health, Bethesda MD, USA.
Won KimNational Library of Medicine, National Institutes of Health, Bethesda MD, USA.
Natalie XieNational Library of Medicine, National Institutes of Health, Bethesda MD, USA.
W John WilburNational Library of Medicine, National Institutes of Health, Bethesda MD, USA.
Zhiyong LuNational Library of Medicine, National Institutes of Health, Bethesda MD, USA.
United States National Library of Medicine · US

Funding

Query Log Analysis for Improving User Access to NCBI Web ServicesZIALM000001 · NLM · NATIONAL LIBRARY OF MEDICINE · PI LU, ZHIYONG · 2011 to 2021
$12.8M
6 · The paper itself

Abstract

The need to organize a large collection in a manner that facilitates human comprehension is crucial given the ever-increasing volumes of information. In this work, we present PDC (probabilistic distributional clustering), a novel algorithm that, given a document collection, computes disjoint term sets representing topics in the collection. The algorithm relies on probabilities of word co-occurrences to partition the set of terms appearing in the collection of documents into disjoint groups of related terms. In this work, we also present an environment to visualize the computed topics in the term space and retrieve the most related PubMed articles for each group of terms. We illustrate the algorithm by applying it to PubMed documents on the topic of suicide. Suicide is a major public health problem identified as the tenth leading cause of death in the US. In this application, our goal is to provide a global view of the mental health literature pertaining to the subject of suicide, and through this, to help create a rich environment of multifaceted data to guide health care researchers in their endeavor to better understand the breadth, depth and scope of the problem. We demonstrate the usefulness of the proposed algorithm by providing a web portal that allows mental health researchers to peruse the suicide-related literature in PubMed.

Identifiers

PMID32477645
PMCPMC7233029
OpenAlexW2993813606

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.