Evidence map›Paper›PMID 32477070›Full record

ArticleFrontiers in cellular neuroscience2020

Cytoplasmic TDP43 Binds microRNAs: New Disease Targets in Amyotrophic Lateral Sclerosis.

Ximena Paez-Colasante, Claudia Figueroa-Romero, Amy E Rumora, Junguk Hur, Faye E Mendelson, John M Hayes, Carey Backus, Ghislaine F Taubman, Laurie Heinicke, Nils G Walter and 3 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular neuroscience, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.6field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  5. Versatile CRISPR-Cas Tools for Gene Regulation in Zebrafish via an Enhanced Q Binary System.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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  17. Systems Biology to Address Unmet Medical Needs in Neurological Disorders.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  18. Article
  19. A Multiscale Model to Identify Limiting Factors in Nanoparticle-Based miRNA Delivery for Tumor InhibitionAnnual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference · 2021
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Ximena Paez-ColasanteDepartment of Neurology, University of Michigan, Ann Arbor, MI, United States.
Claudia Figueroa-RomeroDepartment of Neurology, University of Michigan, Ann Arbor, MI, United States.
Amy E RumoraDepartment of Neurology, University of Michigan, Ann Arbor, MI, United States.
Junguk HurDepartment of Biomedical Sciences, School of Medicine and Health Sciences, University of North Dakota, Grand Forks, ND, United States.
Faye E MendelsonDepartment of Neurology, University of Michigan, Ann Arbor, MI, United States.
John M HayesDepartment of Neurology, University of Michigan, Ann Arbor, MI, United States.
Carey BackusDepartment of Neurology, University of Michigan, Ann Arbor, MI, United States.
Ghislaine F TaubmanDepartment of Neurology, University of Michigan, Ann Arbor, MI, United States.
Laurie HeinickeSingle Molecule Analysis Group, Department of Chemistry, University of Michigan, Ann Arbor, MI, United States.
Nils G WalterSingle Molecule Analysis Group, Department of Chemistry, University of Michigan, Ann Arbor, MI, United States.
Sami J BarmadaDepartment of Neurology, University of Michigan, Ann Arbor, MI, United States.
Stacey A SakowskiDepartment of Neurology, University of Michigan, Ann Arbor, MI, United States.
Eva L FeldmanDepartment of Neurology, University of Michigan, Ann Arbor, MI, United States.
University of Michigan–Ann Arbor · USAnalysis Group (United States) · USUniversity of North Dakota · US

Funding

Michigan Alzheimer's Disease Core CenterP30AG053760 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ROBERTS, SCOTT · 2016 to 2020
$10.1M
U-turn of the Hepatitis Delta Virus RibozymeR01GM062357 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WALTER, NILS G · 2001 to 2019
$5.8M
RNA decay in amyotrophic lateral sclerosis and frontotemporal lobar degenerationR01NS097542 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BARMADA, SAMI · 2016 to 2025
$3.8M
Atypical TDP43 isoforrms driving neurodegeneration in FTD/ALSR01NS113943 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BARMADA, SAMI · 2020 to 2024
$1.9M
Trekking with the Ribognome: Single Molecule Microscopy of Intracellular miRNPsR01GM081025 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WALTER, NILS G · 2007 to 2010
$998k
Sphingolipid and Fatty Acid Biology in Prediabetes and NeuropathyR00DK119366 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI RUMORA, AMY E. · 2021 to 2023
$747k
Sphingolipid and Fatty Acid Biology in Prediabetes and NeuropathyK99DK119366 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RUMORA, AMY E. · 2019 to 2020
$182k
Identifying Alterations in Mitochondrial Dynamics Associated with Diabetic NeuropathyF32DK112642 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RUMORA, AMY E. · 2017 to 2017
$57k
NIA NIH HHS P30 AG053760NIDDK NIH HHS F32 DK112642NIDDK NIH HHS K99 DK119366NIDDK NIH HHS R00 DK119366NIGMS NIH HHS R01 GM062357NIGMS NIH HHS R01 GM081025NINDS NIH HHS R01 NS097542NINDS NIH HHS R01 NS113943
6 · The paper itself

Abstract

Amyotrophic lateral sclerosis (ALS) is a progressive, fatal, and incurable neurodegenerative disease. Recent studies suggest that dysregulation of gene expression by microRNAs (miRNAs) may play an important role in ALS pathogenesis. The reversible nature of this dysregulation makes miRNAs attractive pharmacological targets and a potential therapeutic avenue. Under physiological conditions, miRNA biogenesis, which begins in the nucleus and includes further maturation in the cytoplasm, involves trans-activation response element DNA/RNA-binding protein of 43 kDa (TDP43). However, TDP43 mutations or stress trigger TDP43 mislocalization and inclusion formation, a hallmark of most ALS cases, that may lead to aberrant protein/miRNA interactions in the cytoplasm. Herein, we demonstrated that TDP43 exhibits differential binding affinity for select miRNAs, which prompted us to profile miRNAs that preferentially bind cytoplasmic TDP43. Using cellular models expressing TDP43 variants and miRNA profiling analyses, we identified differential levels of 65 cytoplasmic TDP43-associated miRNAs. Of these, approximately 30% exhibited levels that differed by more than 3-fold in the cytoplasmic TDP43 models relative to our control model. The hits included both novel miRNAs and miRNAs previously associated with ALS that potentially regulate several predicted genes and pathways that may be important for pathogenesis. Accordingly, these findings highlight specific miRNAs that may shed light on relevant disease pathways and could represent potential biomarkers and reversible treatment targets for ALS.

Indexed as

amyotrophic lateral sclerosiscytoplasmic aggregatesmicroRNAsprofilingtrans-activation response element DNA/RNA-binding protein of 43 kDa (TDP43)

Identifiers

PMID32477070
PMCPMC7235295
OpenAlexW3024244753

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.