Evidence map›Paper›PMID 32476706›Full record

ArticleProceedings of SPIE--the International Society for Optical Engineering2020

Fully automated segmentation of the right ventricle in patients with repaired Tetralogy of Fallot using U-Net.

Christopher T Tran, Martin Halicek, James D Dormer, Animesh Tandon, Tarique Hussain, Baowei Fei

Open access · greenAbstract read
In one paragraph

Article in Proceedings of SPIE--the International Society for Optical Engineering, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Automated biventricular quantification in patients with repaired tetralogy of Fallot using a three-dimensional deep learning segmentation model.Journal of cardiovascular magnetic resonance : official journal of the Society for Cardiovascular Magnetic Resonance · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Christopher T TranUniversity of Texas at Dallas, Department of Bioengineering, Richardson, TX, USA.
Martin HalicekUniversity of Texas at Dallas, Department of Bioengineering, Richardson, TX, USA.
James D DormerGeorgia Inst. of Tech. and Emory Univ., Dept. of Biomedical Engineering, Atlanta, GA.
Animesh TandonDept. of Radiology, Univ. of Texas Southwestern Medical Center, Dallas, TX.
Tarique HussainDept. of Radiology, Univ. of Texas Southwestern Medical Center, Dallas, TX.
Baowei FeiUniversity of Texas at Dallas, Department of Bioengineering, Richardson, TX, USA.
The University of Texas at Dallas · USThe University of Texas Southwestern Medical Center · USEmory University · US

Funding

Image-guided Intravascular Robotic System for Mitral Valve Repair and ImplantsR01HL140325 · NHLBI · GEORGIA INSTITUTE OF TECHNOLOGY · PI DESAI, JAYDEV P., FEI, BAOWEI · 2018 to 2021
$3.0M
ACADEMIC-INDUSTRIAL PARTNERSHIP FOR TRANSLATION OF PET/TRUS GUIDED INTERVENTIONR01CA204254 · NCI · UNIVERSITY OF TEXAS DALLAS · PI FEI, BAOWEI · 2017 to 2021
$2.0M
MOLECULAR IMAGING DIRECTED, 3D ULTRASOUND-GUIDED, BIOPSY SYSTEMR01CA156775 · NCI · UNIVERSITY OF TEXAS DALLAS · PI FEI, BAOWEI · 2011 to 2016
$1.7M
STAN-CT: Standardization and Normalization of CT images for Lung Cancer PatientsR21CA231911 · NCI · UNIVERSITY OF KENTUCKY · PI CHEN, JIN, FEI, BAOWEI · 2019 to 2020
$389k
NCI NIH HHS R01 CA156775NCI NIH HHS R01 CA204254NCI NIH HHS R21 CA231911NHLBI NIH HHS R01 HL140325
6 · The paper itself

Abstract

Cardiac magnetic resonance (CMR) imaging is considered the standard imaging modality for volumetric analysis of the right ventricle (RV), an especially important practice in the evaluation of heart structure and function in patients with repaired Tetralogy of Fallot (rTOF). In clinical practice, however, this requires time-consuming manual delineation of the RV endocardium in multiple 2-dimensional (2D) slices at multiple phases of the cardiac cycle. In this work, we employed a U-Net based 2D convolutional neural network (CNN) classifier in the fully automatic segmentation of the RV blood pool. Our dataset was comprised of 5,729 short-axis cine CMR slices taken from 100 individuals with rTOF. Training of our CNN model was performed on images from 50 individuals while validation was performed on images from 10 individuals. Segmentation results were evaluated by Dice similarity coefficient (DSC) and Hausdorff distance (HD). Use of the CNN model on our testing group of 40 individuals yielded a median DSC of 90% and a median 95

Indexed as

Cardiac magnetic resonance imagingConvolutional neural network (CNN)Deep learningHeartImage segmentationLeft ventricleTetralogy of Fallot

Identifiers

PMID32476706
PMCPMC7261612
OpenAlexW3008274081

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.