Evidence map›Paper›PMID 32476131›Full record

ArticleThe Journal of pathology2020

Three-dimensional analysis of extrahepatic cholangiocarcinoma and tumor budding.

Tadashi Yoshizawa, Seung-Mo Hong, DongJun Jung, Michaël Noë, Ashley Kiemen, Pei-Hsun Wu, Denis Wirtz, Ralph H Hruban, Laura D Wood, Kiyoko Oshima

Open access · greenAbstract read
In one paragraph

Article in The Journal of pathology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
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  5. Collective migration modes in development, tissue repair and cancer.Nature reviews. Molecular cell biology · 2025
    Review
  6. Article
  7. Article
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  9. Review
  10. COMethods and protocols · 2024
    Article
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  16. Multidimensional Imaging of Breast Cancer.Cold Spring Harbor perspectives in medicine · 2023
    Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Tadashi YoshizawaDepartment of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD, USA.
Seung-Mo HongDepartment of Pathology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Republic of Korea.
DongJun JungDepartment of Medicine, Graduate school, University of Ulsan, Seoul, Republic of Korea.
Michaël NoëDepartment of Oncology, The Sol Goldman Pancreatic Cancer Research Center, Johns Hopkins Medical Institutions, Baltimore, MD, USA.ORCID 0000-0002-5336-4508
Ashley KiemenDepartment of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, MD, USA.
Pei-Hsun WuDepartment of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, MD, USA.
Denis WirtzDepartment of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD, USA.
Ralph H HrubanDepartment of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD, USA.ORCID 0000-0003-4554-5672
Laura D WoodDepartment of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD, USA.
Kiyoko OshimaDepartment of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD, USA.ORCID 0000-0002-3357-6247
Johns Hopkins University · USUlsan College · KRUniversity of Ulsan · KR

Funding

The Role of Physical Cues in Collective Cell InvasionU54CA210173 · NCI · JOHNS HOPKINS UNIVERSITY · PI WIRTZ, DENIS · 2016 to 2020
$9.9M
Acquisition of a Carl Zeiss Lightsheet Z.1 Fluorescence MicroscopeS10OD020152 · OD · JOHNS HOPKINS UNIVERSITY · PI MCCAFFERY, J. MICHAEL · 2016 to 2016
$597k
Johns Hopkins UniversityNCI NIH HHS U54 CA210173NIH HHS S10 OD020152
6 · The paper itself

Abstract

Advances in tissue clearing and microscopy make it possible to study human diseases in three dimensions (3D). High-grade tumor budding is known to be associated with poor prognosis in various cancers; however, little is known about the 3D architecture of tumor budding. Using tissue clearing, we analyzed the 3D structure of tumor budding and E-cadherin expression in 31 extrahepatic cholangiocarcinomas. A total of 31 thick slabs (up to 5 mm) were harvested from surgically resected tumor tissue, including 27 hilar and 4 distal cholangiocarcinomas. Twenty-eight cases were adenocarcinoma, and three were undifferentiated carcinoma. After clearing, the tissues were immunolabeled with antibodies to cytokeratin 19 and to E-cadherin, and then visualized using light-sheet and confocal laser scanning microscopy. Tumor budding was evaluated in hematoxylin and eosin-stained sections (2D) using standard pathological criteria. Of the 31 cancers, 13 showed low-grade tumor budding and 18 showed high-grade tumor budding. First, 3D analysis revealed that the neoplastic cells in tumor buds of adenocarcinoma were typically not individual islands of cells, but rather tips of attenuated protrusions connected to the main tumor. Second, adenocarcinomas with low-grade tumor budding were composed predominantly of tubules that only focally form cords at the periphery. By contrast, adenocarcinomas with high-grade tumor budding predominantly formed cords in both centers and peripheries of the tumors. Third, adenocarcinoma with low-grade tumor budding was characterized by a few short protrusions with few branches, whereas adenocarcinoma with high-grade tumor budding was characterized by longer protrusions with more branching. Finally, immunolabeling of E-cadherin was stronger in the center of the adenocarcinoma but decreased at the tips of protrusions. E-cadherin loss was more extensive in the protrusions of high-grade tumor budding than in the protrusions of low-grade tumor budding. Our findings suggest that tumor buds as seen in 2D are, in fact, cross-sections of attenuated but contiguous protrusions extending from the main tumor. © 2020 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd.

Indexed as

Imaging, Three-DimensionalAdenocarcinomaAdultAgedAntigens, CDBile Duct NeoplasmsBile Ducts, IntrahepaticBiomarkers, TumorCadherinsCholangiocarcinomaHumansMiddle AgedAntigens, CDBiomarkers, TumorCadherinsCDH1 protein, human3D imagingbile ductsconfocal microscopyneoplasia

Identifiers

PMID32476131
PMCPMC9920311
OpenAlexW3032484421

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.