Evidence map›Paper›PMID 32476062›Full record

ArticleActa neuropathologica2020

An optimized workflow to improve reliability of detection of KIAA1549:BRAF fusions from RNA sequencing data.

Alexander C Sommerkamp, Sebastian Uhrig, Damian Stichel, Pascal St-Onge, Pengbo Sun, Natalie Jäger, Andreas von Deimling, Felix Sahm, Stefan M Pfister, Andrey Korshunov and 4 more

Abstract read
In one paragraph

Article in Acta neuropathologica, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Fusion Transcript Detection from Short-Read RNA-Seq.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  2. Article
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Alexander C SommerkampHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
Sebastian UhrigComputational Oncology Group, Molecular Diagnostics Program at the National Center for Tumor Diseases (NCT) and DKFZ, Heidelberg, Germany.
Damian StichelDepartment of Neuropathology, University Hospital Heidelberg, Heidelberg, Germany.
Pascal St-OngeDivision of Hematology-Oncology, Charles-Bruneau Cancer Centre, CHU Sainte-Justine, Montreal, Canada.
Pengbo SunHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
Natalie JägerHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
Andreas von DeimlingDepartment of Neuropathology, University Hospital Heidelberg, Heidelberg, Germany.
Felix SahmHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
Stefan M PfisterHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
Andrey KorshunovHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
Daniel SinnettDivision of Hematology-Oncology, Charles-Bruneau Cancer Centre, CHU Sainte-Justine, Montreal, Canada.
Nada JabadoDepartment of Pediatrics, Faculty of Medicine, McGill University, Montreal, Canada.
Annika K WefersHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
David T W JonesHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany. david.jones@kitz-heidelberg.de.ORCID http://orcid.org/0000-0002-2036-5141

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

WorkflowAstrocytomaHumansOncogene Proteins, FusionSequence Analysis, RNABRAF-KIAA1549 fusion protein, humanOncogene Proteins, Fusion

Identifiers

PMID32476062
PMCPMC7360662

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.