Evidence map›Paper›PMID 32476049›Full record

ArticleMolecular genetics and genomics : MGG2020

Quantitative trait loci influencing days to flowering and plant height in cowpea, Vigna unguiculata (L.) Walp.

Brijesh Angira, Yang Zhang, Chantel F Scheuring, Yadong Zhang, Laura Masor, Julie R Coleman, Yun-Hua Liu, Bir B Singh, Hong-Bin Zhang, Dirk B Hays and 1 more

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Molecular genetics and genomics : MGG, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Cowpea Constraints and Breeding in Europe.Plants (Basel, Switzerland) · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Brijesh AngiraDepartment of Soil and Crop Sciences, Texas A&M University, College Station, Texas, 77843, USA.
Yang ZhangDepartment of Soil and Crop Sciences, Texas A&M University, College Station, Texas, 77843, USA.
Chantel F ScheuringDepartment of Soil and Crop Sciences, Texas A&M University, College Station, Texas, 77843, USA.
Yadong ZhangInstitute of Food Crops, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, Jiangsu, China.
Laura MasorDepartment of Soil and Crop Sciences, Texas A&M University, College Station, Texas, 77843, USA.
Julie R ColemanDepartment of Soil and Crop Sciences, Texas A&M University, College Station, Texas, 77843, USA.
Yun-Hua LiuDepartment of Soil and Crop Sciences, Texas A&M University, College Station, Texas, 77843, USA.
Bir B SinghDepartment of Soil and Crop Sciences, Texas A&M University, College Station, Texas, 77843, USA.
Hong-Bin ZhangDepartment of Soil and Crop Sciences, Texas A&M University, College Station, Texas, 77843, USA.ORCID http://orcid.org/0000-0002-3322-6263
Dirk B HaysDepartment of Soil and Crop Sciences, Texas A&M University, College Station, Texas, 77843, USA.
Meiping ZhangDepartment of Soil and Crop Sciences, Texas A&M University, College Station, Texas, 77843, USA. mpzhang@tamu.edu.
Texas A&M University · USJiangsu Academy of Agricultural Sciences · CN

Funding

The USDA National Institute of Food and Agriculture 2014-67013-21590
6 · The paper itself

Abstract

Cowpea (Vigna unguiculate (L.) Walp.) is a worldwide important multifunctional legume crop for food grain, vegetable, fodder, and cover crop. Nevertheless, only limited research has been conducted on agronomic traits. Here, we report quantitative trait locus (QTL) analysis of the days to flowering (DTF) and plant height (PH) using a dense SNP linkage map recently developed from a recombinant inbred line (RIL) population derived from a cross between Golden Eye Cream and IT98K-476-8. The population was phenotyped for DTF and PH through field and greenhouse trials under two environments. The QTLs controlling these traits were mapped using multiple-environment combined and individual trial phenotypic data. The combined data analysis identified one major QTL (qDTF9.1) for DTF, and one major QTL (qPH9.1) and a minor QTL (qPH4.1) for PH. qDTF9.1 and qPH9.1 were adjacent to each other on Chromosome 9 and each explained 29.3% and 29.5% of the phenotypic variation (PVE), respectively. The individual trial data analysis identified a minor QTL (qDTF2.1) on Chromosome 2 for DTF and two minor QTLs (qPH4.1 and qPH4.2) on Chromosome 4 for PH, while the major QTLs, qDTF9.1 and qPH9.1, were consistently identified in all trials conducted. Epistasis analysis revealed that qDTF9.1 interacted with one locus on Chromosome 4, contributed 50% of the PVE, and qPH9.1 interacted with one locus on each of Chromosomes 4 and 6, contributing 30% and 23% of the PVE, respectively, suggesting that epistasis plays an important role in the trait performance. These results, therefore, provide a deeper understanding of the genetic architecture of plant DTF and PH, and molecular tools necessary for cloning the genes and for enhanced cowpea breeding.

Indexed as

Quantitative Trait LociChromosome MappingChromosomes, PlantCrosses, GeneticEpistasis, GeneticFlowersPhenotypePolymorphism, Single NucleotideVignaCowpeaDays to floweringGenomic positionPlant heightQTL mapping

Identifiers

PMID32476049
OpenAlexW3030178373

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.