Evidence map›Paper›PMID 32474838›Full record

ArticlePlanta2020

Long-term transcriptional memory in rice plants submitted to salt shock.

Marcelo N do Amaral, Luis Willian P Arge, Priscila A Auler, Tatiana Rossatto, Cristini Milech, Ariano Martins de Magalhães, Eugenia Jacira B Braga

Abstract read
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In one paragraph

Article in Planta, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Transcriptional Memory inPlants (Basel, Switzerland) · 2022
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Marcelo N do AmaralDepartment of Botany, Institute of Biology, Federal University of Pelotas, Pelotas, RS, Brazil. marcelo.amaral@ufpel.edu.br.ORCID http://orcid.org/0000-0003-3180-7803
Luis Willian P ArgeLaboratory of Molecular Genetics and Plant Biotechnology, CCS Institute of Biology, Federal University of Rio de Janeiro, Rio de Janeiro, RJ, Brazil.
Priscila A AulerDepartment of Botany, Institute of Biology, Federal University of Pelotas, Pelotas, RS, Brazil.
Tatiana RossattoDepartment of Botany, Institute of Biology, Federal University of Pelotas, Pelotas, RS, Brazil.
Cristini MilechDepartment of Botany, Institute of Biology, Federal University of Pelotas, Pelotas, RS, Brazil.
Ariano Martins de MagalhãesEmbrapa Clima Temperado, Pelotas, RS, Brazil.
Eugenia Jacira B BragaDepartment of Botany, Institute of Biology, Federal University of Pelotas, Pelotas, RS, Brazil.
Universidade Federal de Pelotas · BRBrazilian Agricultural Research Corporation · BRUniversidade Federal do Rio de Janeiro · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionA first salt shock event alters transcriptional and physiological responses to a second event, being possible to identify 26 genes associated with long-term memory. Soil salinity significantly affects rice cultivation, resulting in large losses in growth and productivity. Studies report that a disturbing event can prepare the plant for a subsequent event through memory acquisition, involving physiological and molecular processes. Therefore, genes that provide altered responses in subsequent events define a category known as "memory genes". In this work, the RNA-sequencing (RNA-Seq) technique was used to analyse the transcriptional profile of rice plants subjected to different salt shock events and to characterise genes associated with long-term memory. Plants subjected to recurrent salt shock showed differences in stomatal conductance, chlorophyll index, electrolyte leakage, and the number of differentially expressed genes (DEGs), and they had lower Na

Indexed as

Stress, PhysiologicalGene Expression ProfilingOryzaSalinitySequence Analysis, RNASodium ChlorideTime FactorsSodium ChlorideMemory genesOryza sativa L.Recurrent stressRevised response genes

Identifiers

PMID32474838
OpenAlexW3030848289

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.