Evidence map›Paper›PMID 32472697›Full record

ArticleClinical pharmacology and therapeutics2020

Genomewide Association Study of Platelet Reactivity and Cardiovascular Response in Patients Treated With Clopidogrel: A Study by the International Clopidogrel Pharmacogenomics Consortium.

Shefali Setia Verma, Thomas O Bergmeijer, Li Gong, Jean-Luc Reny, Joshua P Lewis, Braxton D Mitchell, Dimitrios Alexopoulos, Daniel Aradi, Russ B Altman, Kevin Bliden and 39 more

Open access · bronzeAbstract readMulticenter Study
In one paragraph

Article in Clinical pharmacology and therapeutics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
4.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 54 citations in OpenAlex.

  1. Trial
  2. Observational
  3. Polygenic risk scores in pharmacogenomics: methodological challenges, current applications, and perspectives for clinical implementation.Medizinische Genetik : Mitteilungsblatt des Berufsverbandes Medizinische Genetik e.V · 2026
    Article
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  7. Review
  8. Article
  9. IsGenes · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Pharmacogenetics of Antiplatelet Therapy.Annual review of pharmacology and toxicology · 2023
    Review
  16. The Role of Global and Local Ancestry on Clopidogrel Response in African Americans.Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing · 2023
    Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

49 authors at 20 institutions in 15 countries.

Shefali Setia VermaDepartment of Genetics and Institute for Biomedical Informatics, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Thomas O BergmeijerDepartment of Cardiology, St. Antonius Center for Platelet Function Research, Nieuwegein, The Netherlands.
Li GongDepartment of Biomedical Data Science, Stanford University, Stanford, California, USA.
Jean-Luc RenyInternal Medicine, Béziers Hospital, Béziers, France.
Joshua P LewisDepartment of Medicine and Program for Personalized and Genomic Medicine, University of Maryland, Baltimore, Maryland, USA.
Braxton D MitchellDepartment of Medicine and Program for Personalized and Genomic Medicine, University of Maryland, Baltimore, Maryland, USA.
Dimitrios AlexopoulosNational and Kapodistrian University of Athens Medical School, Attikon University Hospital, Athens, Greece.
Daniel AradiDepartment of Cardiology, Heart Center Balatonfüred, Balatonfüred, Hungary.
Russ B AltmanDepartment of Bioengineering, Genetics and Medicine, Stanford University, Stanford, California, USA.
Kevin BlidenSinai Center for Thrombosis Research and Drug Development, Baltimore, Maryland, USA.
Yuki BradfordDepartment of Genetics and Institute for Biomedical Informatics, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Gianluca CampoCardiology Unit, Azienda Ospedaliero-Universitaria di Ferrara, Ferrara and Maria Cecilia Hospital, GVM Care and Research, Cotignola, Italy.
Kiyuk ChangDepartment of Internal Medicine, Cardiology Division, Seoul St. Mary's Hospital, The Catholic University of Korea, Seoul, South Korea.
John H CleatorDivision of Cardiology and Department of Pharmacology, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Jean-Pierre DéryQuebec Heart and Lung Institute, University Laval, Quebec City, QC, Canada.
Nadia P DridiDepartment of Cardiology, Rigshospitalet, Copenhagen University Hospital, Copenhagen, Denmark.
Israel Fernandez-CadenasNeurology, Stroke Pharmacogenomics and Genetics Group, Sant Pau Institute of Research, Barcelona, Spain.
Pierre FontanaDepartment of Biomedical Data Science, Stanford University, Stanford, California, USA.
Meinrad GawazDepartment of Cardiology and Angiology, University of Tübingen, Tübingen, Germany.
Tobias GeislerDepartment of Cardiology and Angiology, Medizinische Klinik III, University Hospital Tübingen, Tübingen, Germany.
Gian Franco GensiniDepartment of Experimental and Clinical Medicine, University of Florence, Florence, Italy.
Betti GiustiDepartment of Experimental and Clinical Medicine, University of Florence, Florence, Italy.
Paul A GurbelSinai Center for Thrombosis Research and Drug Development, Baltimore, Maryland, USA.
Willibald HochholzerDepartment of Cardiology and Angiology II, University Heart Center Freiburg Bad Krozingen, Bad Krozingen, Germany.
Lene HolmvangDepartment of Cardiology, Rigshospitalet, Copenhagen University Hospital, Copenhagen, Denmark.
Eun-Young KimDepartment of Clinical Pharmacology, Inje University, Busan Paik Hospital, Busan, South Korea.
Ho-Sook KimDepartment of Clinical Pharmacology, Inje University, Busan Paik Hospital, Busan, South Korea.
Rossella MarcucciDepartment of Experimental and Clinical Medicine, University of Florence, Florence, Italy.
Joan MontanerNeurovascular Research Laboratory, Vall d'Hebron Institute of Research, Barcelona, Spain.
Joshua D BackmanDepartment of Medicine and Program for Personalized and Genomic Medicine, University of Maryland, Baltimore, Maryland, USA.
Ruth E PakyzDepartment of Medicine and Program for Personalized and Genomic Medicine, University of Maryland, Baltimore, Maryland, USA.
Dan M RodenMedicine, Pharmacology, and Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Elke SchaeffelerDr. Margarete Fischer-Bosch Institute of Clinical Pharmacology and University of Tübingen, Tübingen, Germany.
Matthias SchwabDr. Margarete Fischer-Bosch Institute of Clinical Pharmacology and University of Tübingen, Tübingen, Germany.
Jae Gook ShinDepartment of Clinical Pharmacology, Inje University, Busan Paik Hospital, Busan, South Korea.
Jolanta M Siller-MatulaDepartment of Internal Medicine II, Division of Cardiology, Medical University of Vienna, Vienna, Austria.
Jurriën M Ten BergDepartment of Cardiology, St. Antonius Center for Platelet Function Research, Nieuwegein, The Netherlands.
Dietmar TrenkDepartment of Cardiology and Angiology II, University Heart Center Freiburg Bad Krozingen, Bad Krozingen, Germany.
Marco ValgimigliDepartment of Cardiology, Swiss Cardiovascular Center Bern, Bern University Hospital, Bern, Switzerland.
John WallaceDepartment of Biochemistry and Molecular Biology, Penn State University, University Park, Pennsylvania, USA.
Ming-Shien WenDivision of Cardiology, Department of Internal Medicine, Chang Gung Memorial Hospital, Linkou and School of Medicine, Chang Gung University, Taoyuan City, Taiwan.
Michiaki KuboCenter for Integrative Medical Sciences, RIKEN, Yokohama, Japan.
Ming Ta Michael LeeGenomic Medicine Institute, Geisinger, Danville, Pennsylvania, USA.
Ryan WhaleyDepartment of Biomedical Data Science, Stanford University, Stanford, California, USA.
Stefan WinterDr. Margarete Fischer-Bosch Institute of Clinical Pharmacology and University of Tübingen, Tübingen, Germany.
Teri E KleinDepartment of Biomedical Data Science, Stanford University, Stanford, California, USA.
Alan R ShuldinerDepartment of Medicine and Program for Personalized and Genomic Medicine, University of Maryland, Baltimore, Maryland, USA.
Marylyn D RitchieDepartment of Genetics and Institute for Biomedical Informatics, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
ICPC Investigators
Stanford University · USUniversity of Maryland, Baltimore · USInje University Busan Paik Hospital · KRUniversity of Florence · ITUniversity of Pennsylvania · USUniversity of Tübingen · DESinai Hospital · USSt. Antonius Ziekenhuis · NLUniversitäts-Herzzentrum Freiburg-Bad Krozingen · DEVanderbilt University Medical Center · USBaltimore VA Medical Center · USCopenhagen University Hospital · DKDr. Margarete Fischer-Bosch-Institute of Clinical Pharmacology · DEHUN-REN Balaton Limnological Research Institute · HULinkou Chang Gung Memorial Hospital · TWMaria Cecilia Hospital · ITMedical University of Vienna · ATNational and Kapodistrian University of Athens · GRPennsylvania State University · USRigshospitalet · DK

Funding

PharmGKB: pharmacogenomics knowledge for precision medicineR24GM061374 · NIGMS · STANFORD UNIVERSITY · PI ALTMAN, RUSS BIAGIO, KLEIN, TERI ELLEN · 2010 to 2018
$25.2M
Pharmacogenomics of Anti-platlet Intervention-2 (PAPI-2) StudyU01HL105198 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI SHULDINER, ALAN R. · 2010 to 2014
$13.6M
PharmGKB: pharmacogenomics discovery and implementationU24HG010615 · NHGRI · STANFORD UNIVERSITY · PI TERI Ellen KLEIN, Michelle Whirl-Carrillo · 2020 to 2026
$9.5M
The Impact of Carboxylesterase 1 ( CES1 ) in Personalized Antiplalet TherapyR01HL137922 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI LEWIS, JOSHUA PATRICK · 2017 to 2021
$1.9M
NHGRI NIH HHS U24 HG010615NHLBI NIH HHS R01 HL137922NHLBI NIH HHS U01 HL105198NIGMS NIH HHS R24 GM061374
6 · The paper itself

Abstract

Antiplatelet response to clopidogrel shows wide variation, and poor response is correlated with adverse clinical outcomes. CYP2C19 loss-of-function alleles play an important role in this response, but account for only a small proportion of variability in response to clopidogrel. An aim of the International Clopidogrel Pharmacogenomics Consortium (ICPC) is to identify other genetic determinants of clopidogrel pharmacodynamics and clinical response. A genomewide association study (GWAS) was performed using DNA from 2,750 European ancestry individuals, using adenosine diphosphate-induced platelet reactivity and major cardiovascular and cerebrovascular events as outcome parameters. GWAS for platelet reactivity revealed a strong signal for CYP2C19*2 (P value = 1.67e-33). After correction for CYP2C19*2 no other single-nucleotide polymorphism reached genomewide significance. GWAS for a combined clinical end point of cardiovascular death, myocardial infarction, or stroke (5.0% event rate), or a combined end point of cardiovascular death or myocardial infarction (4.7% event rate) showed no significant results, although in coronary artery disease, percutaneous coronary intervention, and acute coronary syndrome subgroups, mutations in SCOS5P1, CDC42BPA, and CTRAC1 showed genomewide significance (lowest P values: 1.07e-09, 4.53e-08, and 2.60e-10, respectively). CYP2C19*2 is the strongest genetic determinant of on-clopidogrel platelet reactivity. We identified three novel associations in clinical outcome subgroups, suggestive for each of these outcomes.

Indexed as

Percutaneous Coronary InterventionPharmacogenomic VariantsPolymorphism, Single NucleotideAgedBlood PlateletsCardiovascular DiseasesClopidogrelCoronary Artery DiseaseCytochrome P-450 CYP2C19FemaleGenome-Wide Association StudyHumansMaleMiddle AgedPharmacogeneticsPlatelet Aggregation InhibitorsClopidogrelCYP2C19 protein, humanCytochrome P-450 CYP2C19Platelet Aggregation Inhibitors

Identifiers

PMID32472697
PMCPMC7689744
OpenAlexW3031845473

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.