Evidence map›Paper›PMID 32472129›Full record

ArticleJournal of neuropathology and experimental neurology2020

Dysregulation of the MMP/TIMP Proteolytic System in Subependymal Giant Cell Astrocytomas in Patients With Tuberous Sclerosis Complex: Modulation of MMP by MicroRNA-320d In Vitro.

Anika Bongaarts, Jody M de Jong, Diede W M Broekaart, Jackelien van Scheppingen, Jasper J Anink, Caroline Mijnsbergen, Floor E Jansen, Wim G M Spliet, Wilfred F A den Dunnen, Victoria E Gruber and 17 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of neuropathology and experimental neurology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
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  3. Review
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  7. Article
  8. Review
  9. Extracellular Matrix Biomarkers in Colorectal Cancer.International journal of molecular sciences · 2021
    Review
  10. Observational
  11. Neurooncology: 2021 update.Free neuropathology · 2021
    Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 10 institutions in 4 countries.

Anika BongaartsDepartment of (Neuro)Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, The Netherlands.
Jody M de JongDepartment of (Neuro)Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, The Netherlands.
Diede W M BroekaartDepartment of (Neuro)Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, The Netherlands.
Jackelien van ScheppingenDepartment of (Neuro)Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, The Netherlands.
Jasper J AninkDepartment of (Neuro)Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, The Netherlands.
Caroline MijnsbergenDepartment of (Neuro)Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, The Netherlands.
Floor E JansenDepartment of Pediatric Neurology, University Medical Center Utrecht Brain Center, Utrecht, The Netherlands.
Wim G M SplietDepartment of Pathology, University Medical Center Utrecht, Utrecht, The Netherlands (WGMS); Department of Pathology and Medical Biology, University Medical Center Groningen, University of Groningen, Groningen, The Netherlands (WFAdD).
Wilfred F A den Dunnen
Victoria E GruberDepartment of Pediatrics, Medical University of Vienna, Vienna, Austria.
Theresa SchollDepartment of Pediatrics, Medical University of Vienna, Vienna, Austria.
Johannes A HainfellnerInstitute of Neurology, Medical University of Vienna, Vienna, Austria.
Martha FeuchtDepartment of Pediatrics, Medical University of Vienna, Vienna, Austria.
Julita BorkowskaDepartment of Neurology and Epileptology, Children's Memorial Health Institute, Warsaw, Poland.
Katarzyna KotulskaDepartment of Neurology and Epileptology, Children's Memorial Health Institute, Warsaw, Poland.
Sergiusz JozwiakDepartment of Neurology and Epileptology, Children's Memorial Health Institute, Warsaw, Poland.
Wieslawa GrajkowskaDepartment of Pathology, Children's Memorial Health Institute, Warsaw, Poland.
Anna Maria BuccolieroPathology Unit, Anna Meyer Children's Hospital, Florence, Italy.
Chiara CaporaliniPathology Unit, Anna Meyer Children's Hospital, Florence, Italy.
Flavio GiordanoDepartment of Neurosurgery, Anna Meyer Children's Hospital, Florence, Italy.
Lorenzo GenitoriDepartment of Neurosurgery, Anna Meyer Children's Hospital, Florence, Italy.
Brendon P SciclunaDepartment of Clinical Epidemiology, Biostatistics & Bioinformatics, Center for Experimental & Molecular Medicine, Amsterdam UMC, University of Amsterdam, Amsterdam.
Antoinette Y N Schouten-van MeeterenPrincess Máxima Center for Pediatric Oncology, Utrecht, The Netherlands.
Erwin A van VlietDepartment of (Neuro)Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, The Netherlands.
Angelika MühlebnerDepartment of (Neuro)Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, The Netherlands.
James D MillsDepartment of (Neuro)Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, The Netherlands.
Eleonora AronicaDepartment of (Neuro)Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, The Netherlands.
Amsterdam Neuroscience · NLMedical University of Vienna · ATMeyer Children's Hospital · ITChildren's Memorial Health Institute · PLAmsterdam University Medical Centers · NLEmma Kinderziekenhuis · NLMedical University of Warsaw · PLNetherlands Institute for Neuroscience · NLUniversity Medical Center Groningen · NLUniversity Medical Center Utrecht · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tuberous sclerosis complex (TSC), a rare genetic disorder caused by a mutation in the TSC1 or TSC2 gene, is characterized by the growth of hamartomas in several organs. This includes the growth of low-grade brain tumors, known as subependymal giant cell astrocytomas (SEGA). Previous studies have shown differential expression of genes related to the extracellular matrix in SEGA. Matrix metalloproteinases (MMPs), and their tissue inhibitors (TIMPs) are responsible for remodeling the extracellular matrix and are associated with tumorigenesis. This study aimed to investigate the MMP/TIMP proteolytic system in SEGA and the regulation of MMPs by microRNAs, which are important post-transcriptional regulators of gene expression. We investigated the expression of MMPs and TIMPs using previously produced RNA-Sequencing data, real-time quantitative PCR and immunohistochemistry in TSC-SEGA samples and controls. We found altered expression of several MMPs and TIMPs in SEGA compared to controls. We identified the lowly expressed miR-320d in SEGA as a potential regulator of MMPs, which can decrease MMP2 expression in human fetal astrocyte cultures. This study provides evidence of a dysregulated MMP/TIMP proteolytic system in SEGA of which MMP2 could be rescued by microRNA-320d. Therefore, further elucidating microRNA-mediated MMP regulation may provide insights into SEGA pathogenesis and identify novel therapeutic targets.

Indexed as

ProteolysisAdolescentAdultAstrocytomaBrainCells, CulturedChildChild, PreschoolFemaleHumansInfantMaleMatrix MetalloproteinasesMicroRNAsTissue Inhibitor of MetalloproteinasesTuberous SclerosisMatrix MetalloproteinasesMicroRNAsMIRN320 microRNA, humanTissue Inhibitor of MetalloproteinasesExtracellular matrixMatrix metalloproteinasesMicroRNASubependymal giant cell astrocytoma (SEGA)Tuberous sclerosis complex

Identifiers

PMID32472129
PMCPMC7304985
OpenAlexW3031994354

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.