Evidence map›Paper›PMID 32469363›Full record

ArticleMolecular omics2020

Pan-transcriptomic analysis identified common differentially expressed genes of Acinetobacter baumannii in response to polymyxin treatments.

Mengyao Li, Su Mon Aye, Maizbha Uddin Ahmed, Mei-Ling Han, Chen Li, Jiangning Song, John D Boyce, David R Powell, Mohammad A K Azad, Tony Velkov and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular omics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Disruption ofVirulence · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Mengyao LiBiomedicine Discovery Institute, Infection & Immunity Program and Department of Microbiology, Monash University, 19 Innovation Walk, Melbourne 3800, Australia. yan.zhu@monash.edu jian.li@monash.edu.
Su Mon Aye
Maizbha Uddin Ahmed
Mei-Ling Han
Chen Li
Jiangning Song
John D Boyce
David R Powell
Mohammad A K Azad
Tony Velkov
Yan Zhu
Jian Li
Discovery Institute · USAustralian Regenerative Medicine Institute · AUPurdue University West Lafayette · USThe University of Melbourne · AU

Funding

Targeting the Urgent Need for New Antibiotics against Gram-negative ‘Superbugs’R01AI132154 · NIAID · MONASH UNIVERSITY · PI LI, JIAN, VELKOV, TONY · 2017 to 2021
$4.3M
NIAID NIH HHS R01 AI132154
6 · The paper itself

Abstract

Multidrug-resistant Acinetobacter baumannii is a top-priority Gram-negative pathogen and polymyxins are a last-line therapeutic option. Previous systems pharmacological studies examining polymyxin killing and resistance usually focused on individual strains, and the derived knowledge could be limited by strain-specific genomic context. In this study, we examined the gene expression of five A. baumannii strains (34654, 1207552, 1428368, 1457504 and ATCC 19606) to determine the common differentially expressed genes in response to polymyxin treatments. A pan-genome containing 6061 genes was identified for 89 A. baumannii genomes from RefSeq database which included the five strains examined in this study; 2822 of the 6061 genes constituted the core genome. After 2 mg L

Indexed as

Gene Expression ProfilingTranscriptomeAcinetobacter baumanniiAcinetobacter InfectionsAnti-Bacterial AgentsComputational BiologyDatabases, GeneticGene Expression Regulation, BacterialGene Expression Regulation, EnzymologicGenomicsHumansPhylogenyPolymyxinsTime FactorsAnti-Bacterial AgentsPolymyxins

Identifiers

PMID32469363
PMCPMC7423701
OpenAlexW3026925244

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.