Evidence map›Paper›PMID 32468822›Full record

ArticleThe journal of physical chemistry. B2020

Molecular Structure of Sphingomyelin in Fluid Phase Bilayers Determined by the Joint Analysis of Small-Angle Neutron and X-ray Scattering Data.

Milka Doktorova, Norbert Kučerka, Jacob J Kinnun, Jianjun Pan, Drew Marquardt, Haden L Scott, Richard M Venable, Richard W Pastor, Stephen R Wassall, John Katsaras and 1 more

Open access · greenAbstract read
In one paragraph

Article in The journal of physical chemistry. B, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 46 citations in OpenAlex.

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  12. Lipid21: Complex Lipid Membrane Simulations with AMBER.Journal of chemical theory and computation · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 8 institutions in 4 countries.

Milka DoktorovaDepartment of Integrative Biology and Pharmacology, University of Texas Health Science Center, Houston, Texas 77030, United States.
Norbert KučerkaFrank Laboratory of Neutron Physics, Joint Institute for Nuclear Research, 141980 Dubna, Russia.
Jacob J KinnunDepartment of Physics, Indiana University-Purdue University Indianapolis, Indianapolis, Indiana 46202, United States.
Jianjun PanDepartment of Physics, University of South Florida, Tampa, Florida 33620, United States.ORCID 0000-0002-7042-0022
Drew MarquardtDepartment of Chemistry and Biochemistry, University of Windsor, Windsor, ON N9B 3P4, Canada.ORCID 0000-0001-6848-2497
Haden L ScottCenter for Environmental Biotechnology, University of Tennessee, Knoxville, Tennessee 37996, United States.
Richard M VenableLaboratory of Computational Biology, National Heart, Lung and Blood Institute, National Institutes of Health, Bethesda, Maryland 20892, United States.
Richard W PastorLaboratory of Computational Biology, National Heart, Lung and Blood Institute, National Institutes of Health, Bethesda, Maryland 20892, United States.ORCID 0000-0002-2454-5131
Stephen R WassallDepartment of Physics, Indiana University-Purdue University Indianapolis, Indianapolis, Indiana 46202, United States.
John KatsarasNeutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States.
Frederick A HeberleDepartment of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, United States.ORCID 0000-0002-0424-3240
Indiana University – Purdue University Indianapolis · USNational Institutes of Health · USUniversity of Tennessee at Knoxville · USJoint Institute for Nuclear Research · RUOak Ridge National Laboratory · USThe University of Texas Health Science Center at Houston · USUniversity of South Florida · USUniversity of Windsor · CA

Funding

Computer Simulations of Membranes and BiopolymersZIAHL000340 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI PASTOR, RICHARD WALTER · 2009 to 2025
$29.1M
Transient loss of plasma membrane asymmetry in mammalian cells: mechanisms and functionF32GM134704 · NIGMS · UNIVERSITY OF VIRGINIA · PI DOKTOROVA, MILKA · 2020 to 2022
$204k
Intramural NIH HHS ZIA HL000340NIGMS NIH HHS F32 GM134704
6 · The paper itself

Abstract

We have determined the fluid bilayer structure of palmitoyl sphingomyelin (PSM) and stearoyl sphingomyelin (SSM) by simultaneously analyzing small-angle neutron and X-ray scattering data. Using a newly developed scattering density profile (SDP) model for sphingomyelin lipids, we report structural parameters including the area per lipid, total bilayer thickness, and hydrocarbon thickness, in addition to lipid volumes determined by densitometry. Unconstrained all-atom simulations of PSM bilayers at 55 °C using the C36 CHARMM force field produced a lipid area of 56 Å

Indexed as

Lipid BilayersSphingomyelinsMolecular Dynamics SimulationMolecular StructureNeutronsScattering, Small AngleX-Ray DiffractionX-RaysLipid BilayersSphingomyelins

Identifiers

PMID32468822
PMCPMC7458099
OpenAlexW3029599600

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.