Evidence map›Paper›PMID 32468255›Full record

ArticleMolecular biology reports2020

Characterization and validation of olive FAD and SAD gene families: expression analysis in different tissues and during fruit development.

C Contreras, R Mariotti, S Mousavi, L Baldoni, C Guerrero, L Roka, N Cultrera, P Pierantozzi, D Maestri, L Gentili and 2 more

Abstract read
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In one paragraph

Article in Molecular biology reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 55 citations in OpenAlex.

  1. Pooled it
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  10. Effect of heterologous expression ofFrontiers in plant science · 2024
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  12. KeyInternational journal of molecular sciences · 2023
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  13. The Ancient Olive Trees (Plants (Basel, Switzerland) · 2023
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  14. Genetics of Plant Metabolism.International journal of molecular sciences · 2023
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  15. Article
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  17. Peach fruit PpNAC1 activatesHorticulture research · 2022
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  18. Article
  19. The Oleic/Linoleic Acid Ratio in Olive (Frontiers in plant science · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 4 countries.

C ContrerasEstación Experimental Agropecuaria San Juan, Instituto Nacional de Tecnología Agropecuaria (INTA), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), San Juan, Argentina.
R MariottiCNR - Institute of Biosciences and Bioresources (IBBR), Perugia, Italy. roberto.mariotti@ibbr.cnr.it.ORCID http://orcid.org/0000-0002-9111-5123
S MousaviCNR - Institute of Biosciences and Bioresources (IBBR), Perugia, Italy.
L BaldoniCNR - Institute of Biosciences and Bioresources (IBBR), Perugia, Italy.
C GuerreroDepartment of Molecular Biology and Biochemistry, Science Faculty, University of Malaga, Malaga, Spain.
L RokaDepartment of Biotechnology, Agricultural University of Athens, Athens, Greece.
N CultreraCNR - Institute of Biosciences and Bioresources (IBBR), Perugia, Italy.
P PierantozziEstación Experimental Agropecuaria San Juan, Instituto Nacional de Tecnología Agropecuaria (INTA), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), San Juan, Argentina.
D MaestriInstituto Multidisciplinario de Biología Vegetal, Consejo Nacional de Investigaciones Científicas y Técnicas, Universidad Nacional de Córdoba, Córdoba, Argentina.
L GentiliEstación Experimental Agropecuaria San Juan, Instituto Nacional de Tecnología Agropecuaria (INTA), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), San Juan, Argentina.
M TivaniEstación Experimental Agropecuaria San Juan, Instituto Nacional de Tecnología Agropecuaria (INTA), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), San Juan, Argentina.
M TorresEstación Experimental Agropecuaria San Juan, Instituto Nacional de Tecnología Agropecuaria (INTA), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), San Juan, Argentina.
Centro Científico Tecnológico - San Juan · ARInstitute of Biosciences and Bioresources · ITAgricultural University of Athens · GRConsejo Nacional de Investigaciones Científicas y Técnicas · ARUniversidad de Málaga · ES

Funding

European Union's Horizon 2020 Research and Innovation Program Marie Sklodowska-Curie - Before Project 645595
6 · The paper itself

Abstract

Stearoyl-ACP desaturases (SADs) and fatty acid desaturases (FADs) play a critical role in plant lipid metabolism and also affect oil fatty acid composition introducing double bonds into the hydrocarbon chains to produce unsaturated fatty acids. In the present study, the genomic sequences of three SAD and three FAD candidate genes were characterized in olive and their expression was evaluated in different plant tissues. OeSAD genes corresponded to olive SAD1 and SAD2 and to a newly identified OeSAD4, sharing the conserved protein structure with other plant species. On the other hand, the full-length genomic sequences of two microsomal OeFAD genes (FAD2-1 and FAD2-2) and the plastidial FAD6, were released. When the level of expression was tested on different tissues of cv. Leccino, OeSAD1 and OeSAD2 were mainly expressed in the fruits, while OeFAD genes showed the lowest expression in this tissue. The mRNA profiling of all genes was directly studied in fruits of Leccino and Coratina cultivars during fruit development. In both genotypes, the expression level of OeSAD1 and OeSAD2 had the highest value during and after the pit-hardening period, when oil accumulation in fruit mesocarp is intensively increasing. Furthermore, the expression level of both OeFAD2 genes, which were the main candidates for oleic acid desaturation, were almost negligible during fruit ripening. These results have made possible to define candidate genes of the machinery regulation of fatty acid composition in olive oil, providing information on their sequence, gene structure and chromosomal location.

Indexed as

Fatty Acid DesaturasesFatty AcidsFatty Acids, UnsaturatedFruitGene Expression ProfilingGene Expression Regulation, PlantGenes, PlantMixed Function OxygenasesOleaOleic AcidPlant Growth RegulatorsPlant Proteinsacyl-(acyl-carrier-protein)desaturaseFatty Acid DesaturasesFatty AcidsFatty Acids, UnsaturatedMixed Function OxygenasesOleic AcidPlant Growth RegulatorsPlant ProteinsFADFruit mesocarpGene expressionOlive (olea europaeaRT qPCRSADSubsp. europaeaVar. europaea)

Identifiers

PMID32468255
OpenAlexW3031400608

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.