Evidence map›Paper›PMID 32467506›Full record

ArticleThe American journal of gastroenterology2020

Automated Measurements of Muscle Mass Using Deep Learning Can Predict Clinical Outcomes in Patients With Liver Disease.

Nicholas C Wang, Peng Zhang, Elliot B Tapper, Sameer Saini, Stewart C Wang, Grace L Su

Abstract readEvaluation Study
In one paragraph

Article in The American journal of gastroenterology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it.

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  16. Muscular abnormalities in liver cirrhosis.World journal of gastroenterology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nicholas C WangDepartment of Computational Medicine and Bioinformatics, University of Michigan Medical School, Ann Arbor, Michigan, MI, USA.
Peng ZhangDepartment of Surgery, University of Michigan Medical School, Ann Arbor, Michigan, MI , USA.
Elliot B TapperDepartment of Medicine, University of Michigan Medical School, Ann Arbor, Michigan, MI, USA.
Sameer SainiDepartment of Medicine, University of Michigan Medical School, Ann Arbor, Michigan, MI, USA.
Stewart C WangDepartment of Surgery, University of Michigan Medical School, Ann Arbor, Michigan, MI , USA.
Grace L SuDepartment of Medicine, University of Michigan Medical School, Ann Arbor, Michigan, MI, USA.

Funding

Research BaseP30DK092926 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MARY ELLEN MICHELE HEISLER, ADESUWA B OLOMU · 2011 to 2026
$10.0M
Developing Personalized Treatment for Diabetes Through Novel Imaging MethodsK01DK106296 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ZHANG, PENG · 2016 to 2018
$465k
Leveraging Novel Sources of Data with Analytic Morphomics to Improve Delivery of Specialty Care to At-Risk Veterans with Liver DiseaseI01HX002548 · VA · VETERANS HEALTH ADMINISTRATION · PI SAINI, SAMEER DEV, SU, GRACE L. · 2019 to 2021
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HSRD VA I01 HX002548NIDDK NIH HHS K01 DK106296NIDDK NIH HHS P30 DK092926
6 · The paper itself

Abstract

introductionThere is increasing recognition of the central role of muscle mass in predicting clinical outcomes in patients with liver disease. Muscle size can be extracted from computed tomography (CT) scans, but clinical implementation will require increased automation. We hypothesize that we can achieve this by using artificial intelligence.

methodsUsing deep convolutional neural networks, we trained an algorithm on the Reference Analytic Morphomics Population (n = 5,268) and validated the automated methodology in an external cohort of adult kidney donors with a noncontrast CT scan (n = 1,655). To test the clinical usefulness, we examined its ability to predict clinical outcomes in a prospectively followed cohort of patients with clinically diagnosed cirrhosis (n = 254).

resultsBetween the manual and automated methodologies, we found excellent inter-rater agreement with an intraclass correlation coefficient of 0.957 (confidence interval 0.953-0.961, P < 0.0001) in the adult kidney donor cohort. The calculated dice similarity coefficient was 0.932 ± 0.042, suggesting excellent spatial overlap between manual and automated methodologies. To assess the clinical usefulness, we examined its ability to predict clinical outcomes in a cirrhosis cohort and found that automated psoas muscle index was independently associated with mortality after adjusting for age, gender, and child's classification (P < 0.001). DISCUSSION: We demonstrated that deep learning techniques can allow for automation of muscle measurements on clinical CT scans in a diseased cohort. These automated psoas size measurements were predictive of mortality in patients with cirrhosis showing proof of principal that this methodology may allow for wider implementation in the clinical arena.

Indexed as

Deep LearningAdolescentAdultAgedAlgorithmsCohort StudiesFemaleFibrosisHumansMaleMichiganMiddle AgedMuscle, SkeletalPredictive Value of TestsProspective StudiesTomography, X-Ray Computed

Identifiers

PMID32467506
PMCPMC7415547

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.