Evidence map›Paper›PMID 32467225›Full record

ArticleGenes & development2020

Twist-dependent ratchet functioning downstream from Dorsal revealed using a light-inducible degron.

Jihyun Irizarry, James McGehee, Goheun Kim, David Stein, Angelike Stathopoulos

Abstract read
In one paragraph

Article in Genes & development, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Construction and Characterization of Light-Responsive Transcriptional Systems.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Review
  15. Temporal integration of inductive cues on the way to gastrulation.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jihyun Irizarry *Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, California 91125, USA.
James McGehee *Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, California 91125, USA.
Goheun KimMolecular Cell, and Developmental Biology, University of Texas at Austin, , Austin, Texas 78712, USA.
David SteinMolecular Cell, and Developmental Biology, University of Texas at Austin, , Austin, Texas 78712, USA.
Angelike StathopoulosDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, California 91125, USA.ORCID 0000-0001-6597-2036

Funding

Temporal control of cell patterning, signaling, and movement in early embryosR35GM118146 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI STATHOPOULOS, ANGELIKE · 2016 to 2025
$5.8M
Deciphering when the pivotal transcription factor Dorsal exerts patterning effects using optogeneticsR21HD095639 · NICHD · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI STATHOPOULOS, ANGELIKE · 2018 to 2019
$461k
Experimental Strategies for Light-Induced Elimination of Protein Function in vivoR21OD017964 · OD · UNIVERSITY OF TEXAS AT AUSTIN · PI STEIN, DAVID S. · 2014 to 2015
$421k
NICHD NIH HHS R21 HD095639NIGMS NIH HHS R35 GM118146NIH HHS R21 OD017964
6 · The paper itself

Abstract

Graded transcription factors are pivotal regulators of embryonic patterning, but whether their role changes over time is unclear. A light-regulated protein degradation system was used to assay temporal dependence of the transcription factor Dorsal in dorsal-ventral axis patterning of

Indexed as

AnimalsBody PatterningDrosophila melanogasterDrosophila ProteinsEmbryo, NonmammalianLightNuclear ProteinsPhosphoproteinsProteolysisSnail Family Transcription FactorsTranscription FactorsTwist-Related Protein 1dl protein, DrosophilaDrosophila ProteinsNuclear ProteinsPhosphoproteinsSnail Family Transcription Factorssna protein, DrosophilaTranscription FactorsTwi protein, DrosophilaTwist-Related Protein 1BLIDcis-regulatory moduleDorsal Rel transcription factorDrosophila melanogasterlight-inducible degronmorphogenoptogeneticsSnailTwist

Identifiers

PMID32467225
PMCPMC7328519

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.