Evidence map›Paper›PMID 32461267›Full record

ArticleGenetics2020

Base-Pairing Requirements for Small RNA-Mediated Gene Silencing of Recessive Self-Incompatibility Alleles in

Nicolas Burghgraeve, Samson Simon, Simon Barral, Isabelle Fobis-Loisy, Anne-Catherine Holl, Chloé Ponitzki, Eric Schmitt, Xavier Vekemans, Vincent Castric

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
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  6. Article
  7. Review
  8. Article
  9. The integrative biology of genetic dominance.Biological reviews of the Cambridge Philosophical Society · 2021
    Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Nicolas BurghgraeveCNRS, Univ. Lille, UMR 8198 - Evo-Eco-Paleo, F-59000 Lille, France.ORCID 0000-0002-9076-2767
Samson SimonCNRS, Univ. Lille, UMR 8198 - Evo-Eco-Paleo, F-59000 Lille, France.
Simon BarralCNRS, Univ. Lille, UMR 8198 - Evo-Eco-Paleo, F-59000 Lille, France.
Isabelle Fobis-LoisyLaboratoire Reproduction et Développement des Plantes, Université de Lyon, École Normale Supérieure de Lyon, Université Claude Bernard Lyon 1, Centre National de la Recherche Scientifique, Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement, F-69342, France.ORCID 0000-0003-4522-2515
Anne-Catherine HollCNRS, Univ. Lille, UMR 8198 - Evo-Eco-Paleo, F-59000 Lille, France.
Chloé PonitzkiCNRS, Univ. Lille, UMR 8198 - Evo-Eco-Paleo, F-59000 Lille, France.
Eric SchmittCNRS, Univ. Lille, UMR 8198 - Evo-Eco-Paleo, F-59000 Lille, France.
Xavier VekemansCNRS, Univ. Lille, UMR 8198 - Evo-Eco-Paleo, F-59000 Lille, France.ORCID 0000-0002-4836-4394
Vincent CastricCNRS, Univ. Lille, UMR 8198 - Evo-Eco-Paleo, F-59000 Lille, France vincent.castric@univ-lille.fr.ORCID 0000-0002-4461-4915
Centre National de la Recherche Scientifique · FRUnité Évolution, Écologie et Paléontologie · FRUniversité de Lille · FRUniversité Claude Bernard Lyon 1 · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Small noncoding RNAs are central regulators of genome activity and stability. Their regulatory function typically involves sequence similarity with their target sites, but understanding the criteria by which they specifically recognize and regulate their targets across the genome remains a major challenge in the field, especially in the face of the diversity of silencing pathways involved. The dominance hierarchy among self-incompatibility alleles in Brassicaceae is controlled by interactions between a highly diversified set of small noncoding RNAs produced by dominant S-alleles and their corresponding target sites on recessive S-alleles. By controlled crosses, we created numerous heterozygous combinations of S-alleles in

Indexed as

AllelesBase PairingGene SilencingArabidopsisArabidopsis ProteinsGenes, RecessiveHeterozygoteRNA, Small InterferingSelf-Incompatibility in Flowering PlantsArabidopsis ProteinsRNA, Small Interferingallele-specific expression assayArabidopsis halleridominance/recessivityRT-qPCRsporophytic self-incompatibility

Identifiers

PMID32461267
PMCPMC7337072
OpenAlexW3030803346

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.