ArticleBMC plant biology2020
Comparative transcriptome profiling reveals cold stress responsiveness in two contrasting Chinese jujube cultivars.
Article in BMC plant biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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16 citing papers in PubMed, 50 citations in OpenAlex.
- Cold storage characteristics of hardy kiwifruit,Frontiers in plant science · 2025Article
- Genome-Wide Identification of Xyloglucan Endotransglucosylase/Hydrolase Multigene Family in Chinese Jujube (Plants (Basel, Switzerland) · 2024Article
- Understanding of Plant Salt Tolerance Mechanisms and Application to Molecular Breeding.International journal of molecular sciences · 2024Review
- Comparative transcriptomics analysis of tolerant and sensitive genotypes reveals genes involved in the response to cold stress in bitter gourd (Momordica charantia L.).Scientific reports · 2024Article
- Comparative transcriptomics of the chilling stress response in two Asian mangrove species, Bruguiera gymnorhiza and Rhizophora apiculata.Tree physiology · 2024Article
- Integrated metabolome and transcriptome analysis reveals potential mechanism during the bud dormancy transition ofFrontiers in plant science · 2024Article
- Transcriptome analysis revealed molecular basis of cold response inMolecular breeding : new strategies in plant improvement · 2023Article
- Genome-Wide Characterization and Expression Analysis of Transcription Factor Families in Desert MossInternational journal of molecular sciences · 2023Article
- Freezing stress response of wild and cultivated chickpeas.Frontiers in plant science · 2023Article
- Genome-wide identification and expression analysis ofPlant signaling & behavior · 2022Article
- Genome-Wide Identification ofInternational journal of molecular sciences · 2022Article
- Transcriptomics Profiling ofInternational journal of molecular sciences · 2022Article
- Transcriptome analysis of the winter wheat Dn1 in response to cold stress.BMC plant biology · 2022Article
- Efficiency of microbial bio-agents as elicitors in plant defense mechanism under biotic stress: A review.Current research in microbial sciences · 2021Review
- Transcriptome Profiling of Maize (Genes · 2021Article
- Resequencing and transcriptomic analysis reveal differences in nitrite reductase in jujube fruit (Ziziphus jujuba Mill.).Plant methods · 2021Article
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8 authors at 2 institutions in 1 country.
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Abstract
backgroundLow temperature is a major factor influencing the growth and development of Chinese jujube (Ziziphus jujuba Mill.) in cold winter and spring. Little is known about the molecular mechanisms enabling jujube to cope with different freezing stress conditions. To elucidate the freezing-related molecular mechanism, we conducted comparative transcriptome analysis between 'Dongzao' (low freezing tolerance cultivar) and 'Jinsixiaozao' (high freezing tolerance cultivar) using RNA-Seq.
resultsMore than 20,000 genes were detected at chilling (4 °C) and freezing (- 10 °C, - 20 °C, - 30 °C and - 40 °C) stress between the two cultivars. The numbers of differentially expressed genes (DEGs) between the two cultivars were 1831, 2030, 1993, 1845 and 2137 under the five treatments. Functional enrichment analysis suggested that the metabolic pathway, response to stimulus and catalytic activity were significantly enriched under stronger freezing stress. Among the DEGs, nine participated in the Ca
conclusionsOur research first provides a more comprehensive understanding of DEGs involved in freezing stress at the transcriptome level in two Z. jujuba cultivars with different freezing tolerances. These results may help to elucidate the molecular mechanism of freezing tolerance in jujube and also provides new insights and candidate genes for genetically enhancing freezing stress tolerance.
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