Evidence map›Paper›PMID 32460006›Full record

ArticleiScience2020

A Comprehensive Integrated Anatomical and Molecular Atlas of Rat Intrinsic Cardiac Nervous System.

Sirisha Achanta, Jonathan Gorky, Clara Leung, Alison Moss, Shaina Robbins, Leonard Eisenman, Jin Chen, Susan Tappan, Maci Heal, Navid Farahani and 5 more

Open access · goldAbstract read
In one paragraph

Article in iScience, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
9.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 64 citations in OpenAlex.

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  16. aXonica: A support package for MRI based Neuroimaging.Biotechnology notes (Amsterdam, Netherlands) · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Sirisha AchantaDaniel Baugh Institute for Functional Genomics/Computational Biology, Department of Pathology, Anatomy, and Cell Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Jonathan GorkyDaniel Baugh Institute for Functional Genomics/Computational Biology, Department of Pathology, Anatomy, and Cell Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Clara LeungBurnett School of Biomedical Sciences, College of Medicine, University of Central Florida, Orlando, FL, USA.
Alison MossDaniel Baugh Institute for Functional Genomics/Computational Biology, Department of Pathology, Anatomy, and Cell Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Shaina RobbinsDaniel Baugh Institute for Functional Genomics/Computational Biology, Department of Pathology, Anatomy, and Cell Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Leonard EisenmanDaniel Baugh Institute for Functional Genomics/Computational Biology, Department of Pathology, Anatomy, and Cell Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Jin ChenBurnett School of Biomedical Sciences, College of Medicine, University of Central Florida, Orlando, FL, USA.
Susan TappanMBF Bioscience, Williston, VT, USA.
Maci HealMBF Bioscience, Williston, VT, USA.
Navid FarahaniStrateos, San Francisco, CA, USA.
Todd HuffmanStrateos, San Francisco, CA, USA.
Steve EnglandStrateos, San Francisco, CA, USA.
Zixi Jack ChengBurnett School of Biomedical Sciences, College of Medicine, University of Central Florida, Orlando, FL, USA. Electronic address: zixi.cheng@ucf.edu.
Rajanikanth VadigepalliDaniel Baugh Institute for Functional Genomics/Computational Biology, Department of Pathology, Anatomy, and Cell Biology, Thomas Jefferson University, Philadelphia, PA, USA. Electronic address: rajanikanth.vadigepalli@jefferson.edu.
James S SchwaberDaniel Baugh Institute for Functional Genomics/Computational Biology, Department of Pathology, Anatomy, and Cell Biology, Thomas Jefferson University, Philadelphia, PA, USA. Electronic address: james.schwaber@jefferson.edu.
Thomas Jefferson University · USUniversity of Central Florida · USMBF Bioscience (United States) · US

Funding

Comprehensive Structural and Functional Mapping of the Mammalian Cardiac Nervous SystemOT2OD023848 · OD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI EFIMOV, IGOR R, FOWLKES, CHARLESS · 2016 to 2021
$21.4M
Multi-scale, multi-organ, multi-species SPARC map managementOT3OD025349 · OD · UNIVERSITY OF AUCKLAND · PI HUNTER, PETER JOHN, NICKERSON, DAVID PHILLIP · 2017 to 2024
$16.3M
Multiscale Model of the Vagal Outflow to the HeartU01HL133360 · NHLBI · THOMAS JEFFERSON UNIVERSITY · PI SCHWABER, JAMES, VADIGEPALLI, RAJANIKANTH · 2017 to 2021
$2.9M
Nociceptive Afferent Topographical Innervation of the Heart and StomachU01NS113867 · NINDS · UNIVERSITY OF CENTRAL FLORIDA · PI CHENG, ZIXI JACK · 2019 to 2021
$1.6M
Chronic Intermittent Hypoxia: Sympathetic and Intrinsic Cardiac GanglionicInnervationR15HL137143 · NHLBI · UNIVERSITY OF CENTRAL FLORIDA · PI CHENG, ZIXI JACK · 2018 to 2018
$431k
NHLBI NIH HHS R15 HL137143NHLBI NIH HHS U01 HL133360NIH HHS OT2 OD023848NIH HHS OT3 OD025349NINDS NIH HHS U01 NS113867
6 · The paper itself

Abstract

We have developed and integrated several technologies including whole-organ imaging and software development to support an initial precise 3D neuroanatomical mapping and molecular phenotyping of the intracardiac nervous system (ICN). While qualitative and gross anatomical descriptions of the anatomy of the ICN have each been pursued, we here bring forth a comprehensive atlas of the entire rat ICN at single-cell resolution. Our work precisely integrates anatomical and molecular data in the 3D digitally reconstructed whole heart with resolution at the micron scale. We now display the full extent and the position of neuronal clusters on the base and posterior left atrium of the rat heart, and the distribution of molecular phenotypes that are defined along the base-to-apex axis, which had not been previously described. The development of these approaches needed for this work has produced method pipelines that provide the means for mapping other organs.

Indexed as

Cellular NeuroscienceImaging AnatomyMolecular NeuroscienceRodent CardiologySmall Animal ImagingTranscriptomics

Identifiers

PMID32460006
PMCPMC7327996
OpenAlexW3032208513

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.