ArticleMolecular genetics and genomics : MGG2020
QTL mapping for pre-harvest sprouting resistance in japonica rice varieties utilizing genome re-sequencing.
Article in Molecular genetics and genomics : MGG, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.
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Who cites it
13 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.
- Whole-genome meta-analysis coupled with haplotype analysis reveal new genes and functional haplotypes conferring pre-harvest sprouting in rice.BMC plant biology · 2025Pooled it
- Mapping QTLs for PHS resistance and development of a deep learning model to measure PHS rate in japonica rice.The plant genome · 2025Article
- Comparative miRNAome combined with transcriptome and degradome analysis reveals a novel miRNA-mRNA regulatory network associated with starch metabolism affecting pre-harvest sprouting resistance in wheat.BMC plant biology · 2025Article
- Article
- QTL Mapping of Tiller Number in KoreanGenes · 2023Article
- Genome-Wide Association Study for Seed Dormancy Using Re-Sequenced Germplasm under Multiple Conditions in Rice.International journal of molecular sciences · 2023Article
- QTL mapping and improvement of pre-harvest sprouting resistance usingFrontiers in plant science · 2023Article
- Comparative transcriptomic analysis provides insights into the molecular basis underlying pre-harvest sprouting in rice.BMC genomics · 2022Article
- Development and Application of a Target Capture Sequencing SNP-Genotyping Platform in Rice.Genes · 2022Article
- Genomic Variation in KoreanGenes · 2021Article
- Seed Dormancy and Pre-Harvest Sprouting in Rice-An Updated Overview.International journal of molecular sciences · 2021Review
- Genome-Wide Identification and Expression Analysis of OsbZIP09 Target Genes in Rice Reveal Its Mechanism of Controlling Seed Germination.International journal of molecular sciences · 2021Article
- Development of 454 New Kompetitive Allele-Specific PCR (KASP) Markers for TemperatePlants (Basel, Switzerland) · 2020Article
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Authors and funding
16 authors at 1 institution in 1 country.
Funding
Abstract
Pre-harvest sprouting (PHS) leads to serious economic losses because of reductions in yield and quality. To analyze the quantitative trait loci (QTLs) for PHS resistance in japonica rice, PHS rates on panicles were measured in 160 recombinant inbred lines (RILs) derived from a cross between the temperate japonica varieties Odae (PHS resistant) and Unbong40 (PHS susceptible) under two different environmental conditions-field (summer) and greenhouse (winter) environments. Genome re-sequencing of the parental varieties detected 266,773 DNA polymorphisms including 248,255 single nucleotide polymorphisms and 18,518 insertions/deletions. We constructed a genetic map comprising 239 kompetitive allele-specific PCR and 49 cleaved amplified polymorphic sequence markers. In the field environment, two major QTLs, qPHS-3
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