Evidence map›Paper›PMID 32457798›Full record

ArticleFrontiers in genetics2020

Integrative Omics Analysis Reveals a Limited Transcriptional Shock After Yeast Interspecies Hybridization.

Hrant Hovhannisyan, Ester Saus, Ewa Ksiezopolska, Alex J Hinks Roberts, Edward J Louis, Toni Gabaldón

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. JLOH: Inferring loss of heterozygosity blocks from sequencing data.Computational and structural biotechnology journal · 2023
    Article
  3. Article
  4. Article
  5. Article
  6. Editorial: Genomic insights on fungal hybrids.Frontiers in fungal biology · 2022
    Article
  7. Article
  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Hrant HovhannisyanCentre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona, Spain.
Ester SausCentre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona, Spain.
Ewa KsiezopolskaCentre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona, Spain.
Alex J Hinks RobertsCentre for Genetic Architecture of Complex Traits, University of Leicester, Leicester, United Kingdom.
Edward J LouisCentre for Genetic Architecture of Complex Traits, University of Leicester, Leicester, United Kingdom.
Toni GabaldónCentre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona, Spain.
Centre for Genomic Regulation · ESPompeu Fabra University · ESUniversity of Leicester · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The formation of interspecific hybrids results in the coexistence of two diverged genomes within the same nucleus. It has been hypothesized that negative epistatic interactions and regulatory interferences between the two sub-genomes may elicit a so-called genomic shock involving, among other alterations, broad transcriptional changes. To assess the magnitude of this shock in hybrid yeasts, we investigated the transcriptomic differences between a newly formed

Indexed as

allele-specific expressionbufferinghybridizationtranscriptome shockyeast hybrid

Identifiers

PMID32457798
PMCPMC7221068
OpenAlexW3021339553

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.