Evidence map›Paper›PMID 32457347›Full record

ArticleNature communications2020

Genomic adaptations to aquatic and aerial life in mayflies and the origin of insect wings.

Isabel Almudi, Joel Vizueta, Christopher D R Wyatt, Alex de Mendoza, Ferdinand Marlétaz, Panos N Firbas, Roberto Feuda, Giulio Masiero, Patricia Medina, Ana Alcaina-Caro and 16 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
11.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 86 citations in OpenAlex.

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  7. Time-dependent changes in genome-wide gene expression and post-transcriptional regulation across the post-death process in silkworm.DNA research : an international journal for rapid publication of reports on genes and genomes · 2024
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  20. Analysis of theCell genomics · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 11 institutions in 7 countries.

Isabel AlmudiGEM-DMC2 Unit, The CABD (CSIC-UPO-JA), Ctra. de Utrera km 1, 41013, Seville, Spain. isabelalmudi@gmail.com.ORCID http://orcid.org/0000-0001-7978-4394
Joel VizuetaDepartament de Genètica, Microbiologia i Estadística, Facultat de Biologia and Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Barcelona, Spain.ORCID http://orcid.org/0000-0003-0139-3013
Christopher D R WyattCentre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain.
Alex de MendozaAustralian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Perth, Western Australia, Australia.ORCID http://orcid.org/0000-0002-6441-6529
Ferdinand MarlétazMolecular Genetics Unit, Okinawa Institute of Science and Technology, Onna-son, Japan.ORCID http://orcid.org/0000-0001-8124-4266
Panos N FirbasGEM-DMC2 Unit, The CABD (CSIC-UPO-JA), Ctra. de Utrera km 1, 41013, Seville, Spain.
Roberto FeudaDepartment of Genetics and Genome Biology, University of Leicester, University Road, Leicester, LE1 7RH, UK.
Giulio MasieroGEM-DMC2 Unit, The CABD (CSIC-UPO-JA), Ctra. de Utrera km 1, 41013, Seville, Spain.
Patricia MedinaGEM-DMC2 Unit, The CABD (CSIC-UPO-JA), Ctra. de Utrera km 1, 41013, Seville, Spain.ORCID http://orcid.org/0000-0002-7150-6805
Ana Alcaina-CaroGEM-DMC2 Unit, The CABD (CSIC-UPO-JA), Ctra. de Utrera km 1, 41013, Seville, Spain.ORCID http://orcid.org/0000-0002-7352-5890
Fernando CruzCNAG-CRG, Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Baldiri i Reixac 4, 08028, Barcelona, Spain.ORCID http://orcid.org/0000-0003-4098-8829
Jessica Gómez-GarridoCNAG-CRG, Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Baldiri i Reixac 4, 08028, Barcelona, Spain.ORCID http://orcid.org/0000-0001-6409-8009
Marta GutCNAG-CRG, Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Baldiri i Reixac 4, 08028, Barcelona, Spain.
Tyler S AliotoCNAG-CRG, Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Baldiri i Reixac 4, 08028, Barcelona, Spain.ORCID http://orcid.org/0000-0002-2960-5420
Carlos Vargas-ChavezInstitute of Evolutionary Biology (IBE), CSIC-Universitat Pompeu Fabra, Barcelona, Spain.ORCID http://orcid.org/0000-0003-3635-1411
Kristofer DavieLaboratory of Computational Biology, VIB Center for Brain and Disease Research, Herestraat 49, 3000, Louvain, Belgium.ORCID http://orcid.org/0000-0003-2182-1249
Bernhard MisofZoological Research Museum Alexander Koenig, Adenauerallee 160, 53113, Bonn, Germany.
Josefa GonzálezInstitute of Evolutionary Biology (IBE), CSIC-Universitat Pompeu Fabra, Barcelona, Spain.ORCID http://orcid.org/0000-0001-9824-027X
Stein AertsLaboratory of Computational Biology, VIB Center for Brain and Disease Research, Herestraat 49, 3000, Louvain, Belgium.ORCID http://orcid.org/0000-0002-8006-0315
Ryan ListerAustralian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Perth, Western Australia, Australia.ORCID http://orcid.org/0000-0001-6637-7239
Jordi PapsSchool of Biological Sciences, University of Bristol, 24 Tyndall Avenue, Bristol, BS8 1TQ, UK.ORCID http://orcid.org/0000-0003-2636-6636
Julio RozasDepartament de Genètica, Microbiologia i Estadística, Facultat de Biologia and Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Barcelona, Spain.ORCID http://orcid.org/0000-0002-6839-9148
Alejandro Sánchez-GraciaDepartament de Genètica, Microbiologia i Estadística, Facultat de Biologia and Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Barcelona, Spain.ORCID http://orcid.org/0000-0003-4543-4577
Manuel IrimiaCentre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain.ORCID http://orcid.org/0000-0002-2179-2567
Ignacio MaesoGEM-DMC2 Unit, The CABD (CSIC-UPO-JA), Ctra. de Utrera km 1, 41013, Seville, Spain.ORCID http://orcid.org/0000-0002-6440-8457
Fernando CasaresGEM-DMC2 Unit, The CABD (CSIC-UPO-JA), Ctra. de Utrera km 1, 41013, Seville, Spain. fcasfer@upo.es.ORCID http://orcid.org/0000-0002-2181-3858
Consejo Superior de Investigaciones Científicas · ESUniversitat Pompeu Fabra · ESCentre for Genomic Regulation · ESUniversitat de Barcelona · ESAustralian Research Council · AUCenter for Human Genetics · USInstitució Catalana de Recerca i Estudis Avançats · ESOkinawa Institute of Science and Technology Graduate University · JPUniversity of Bristol · GBUniversity of Leicester · GBZoological Research Museum Alexander Koenig · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The evolution of winged insects revolutionized terrestrial ecosystems and led to the largest animal radiation on Earth. However, we still have an incomplete picture of the genomic changes that underlay this diversification. Mayflies, as one of the sister groups of all other winged insects, are key to understanding this radiation. Here, we describe the genome of the mayfly Cloeon dipterum and its gene expression throughout its aquatic and aerial life cycle and specific organs. We discover an expansion of odorant-binding-protein genes, some expressed specifically in breathing gills of aquatic nymphs, suggesting a novel sensory role for this organ. In contrast, flying adults use an enlarged opsin set in a sexually dimorphic manner, with some expressed only in males. Finally, we identify a set of wing-associated genes deeply conserved in the pterygote insects and find transcriptomic similarities between gills and wings, suggesting a common genetic program. Globally, this comprehensive genomic and transcriptomic study uncovers the genetic basis of key evolutionary adaptations in mayflies and winged insects.

Indexed as

Evolution, MolecularWings, AnimalAdaptation, PhysiologicalAnimalsEphemeropteraFemaleGene Expression Regulation, DevelopmentalGenes, InsectGenome, InsectGillsInsectaLife Cycle StagesMalePhylogeny

Identifiers

PMID32457347
PMCPMC7250882
OpenAlexW3031118440

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.