Evidence map›Paper›PMID 32457104›Full record

ArticleAntimicrobial agents and chemotherapy2020

Simulating the Influence of Conjugative-Plasmid Kinetic Values on the Multilevel Dynamics of Antimicrobial Resistance in a Membrane Computing Model.

Marcelino Campos, Álvaro San Millán, José M Sempere, Val F Lanza, Teresa M Coque, Carlos Llorens, Fernando Baquero

Open access · hybridAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Co-evolutionary adaptations ofEvolutionary applications · 2022
    Article
  3. Review
  4. Review
  5. Article
  6. Predicting plasmid persistence in microbial communities by coarse-grained modeling.BioEssays : news and reviews in molecular, cellular and developmental biology · 2021
    Article
  7. Article
  8. Review
  9. Antibiotic resistance: Time of synthesis in a post-genomic age.Computational and structural biotechnology journal · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Marcelino CamposDepartment of Microbiology, Ramón y Cajal University Hospital, IRYCIS, Madrid, Spain.
Álvaro San MillánDepartment of Microbiology, Ramón y Cajal University Hospital, IRYCIS, Madrid, Spain.
José M SempereValencian Research Institute for Artificial Intelligence (VRAIN), Universitat Politècnica de València, Valencia, Spain.
Val F LanzaDepartment of Microbiology, Ramón y Cajal University Hospital, IRYCIS, Madrid, Spain.
Teresa M CoqueDepartment of Microbiology, Ramón y Cajal University Hospital, IRYCIS, Madrid, Spain.
Carlos LlorensBiotechvana, Valencia Technological Park, Paterna, Spain.
Fernando BaqueroDepartment of Microbiology, Ramón y Cajal University Hospital, IRYCIS, Madrid, Spain baquero@bitmailer.net.
Centro de Investigación Biomédica en Red de Epidemiología y Salud Pública · ESInstituto Cajal · ESInstituto Ramón y Cajal de Investigación Sanitaria · ESParc Científic de la Universitat de València · ESUniversitat Politècnica de València · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial plasmids harboring antibiotic resistance genes are critical in the spread of antibiotic resistance. It is known that plasmids differ in their kinetic values, i.e., conjugation rate, segregation rate by copy number incompatibility with related plasmids, and rate of stochastic loss during replication. They also differ in cost to the cell in terms of reducing fitness and in the frequency of compensatory mutations compensating plasmid cost. However, we do not know how variation in these values influences the success of a plasmid and its resistance genes in complex ecosystems, such as the microbiota. Genes are in plasmids, plasmids are in cells, and cells are in bacterial populations and microbiotas, which are inside hosts, and hosts are in human communities at the hospital or the community under various levels of cross-colonization and antibiotic exposure. Differences in plasmid kinetics might have consequences on the global spread of antibiotic resistance. New membrane computing methods help to predict these consequences. In our simulation, conjugation frequency of at least 10

Indexed as

Anti-Bacterial AgentsDrug Resistance, BacterialConjugation, GeneticEcosystemHumansKineticsPlasmidsAnti-Bacterial Agentsantibiotic resistancecomplex systemscomputational biologycomputer modelingconjugationecosystemsmembrane computingplasmids

Identifiers

PMID32457104
PMCPMC7526830
OpenAlexW3027630370

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.