Evidence map›Paper›PMID 32455963›Full record

ArticleCancers2020

An Integrated Genomic Strategy to Identify CHRNB4 as a Diagnostic/Prognostic Biomarker for Targeted Therapy in Head and Neck Cancer.

Yi-Hsuan Chuang, Chia-Hwa Lee, Chun-Yu Lin, Chia-Lin Liu, Sing-Han Huang, Jung-Yu Lee, Yi-Yuan Chiu, Jih-Chin Lee, Jinn-Moon Yang

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.2field-weighted citation impact, top 57% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Yi-Hsuan ChuangInstitute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 300, Taiwan.
Chia-Hwa LeeSchool of Medical Laboratory Science and Biotechnology, College of Medical Science and Technology, Taipei Medical University, Taipei 110, Taiwan.ORCID 0000-0002-6015-2239
Chun-Yu LinInstitute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 300, Taiwan.ORCID 0000-0003-2901-2681
Chia-Lin LiuGraduate Institute of Life Sciences, National Defense Medical Center, Taipei 110, Taiwan.
Sing-Han HuangInstitute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 300, Taiwan.ORCID 0000-0003-0289-2260
Jung-Yu LeeInstitute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 300, Taiwan.
Yi-Yuan ChiuInstitute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 300, Taiwan.
Jih-Chin LeeInstitute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 300, Taiwan.
Jinn-Moon YangInstitute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 300, Taiwan.
Tri-Service General Hospital · TWNational Yang Ming Chiao Tung University · TWNational Defense Medical Center · TWTaipei Medical University · TW

Funding

Higher Education Sprout Project by the Ministry of Education (MOE) in Taiwan the Center for Intelligent Drug Systems and Smart Bio-devices (IDS2B)Ministry of Science and Technology, Taiwan 107-2314-B-016-028Ministry of Science and Technology, Taiwan 108-2634-F-009-012Ministry of Science and Technology, Taiwan 108-2636-B-009-005Taiwan Protein Project (TPP) of Academia Sinica in Taiwan AS-KPQ-105-TPP
6 · The paper itself

Abstract

Although many studies have shown the association between smoking and the increased incidence and adverse prognosis of head and neck squamous cell carcinoma (HNSCC), the mechanisms and pharmaceutical targets involved remain unclear. Here, we integrated gene expression signatures, genetic alterations, and survival analyses to identify prognostic indicators and therapeutic targets for smoking HNSCC patients, and we discovered that the FDA-approved drug varenicline inhibits the target for cancer cell migration/invasion. We first identified 18 smoking-related and prognostic genes for HNSCC by using RNA-Seq and clinical follow-up data. One of these genes, CHRNB4 (neuronal acetylcholine receptor subunit beta-4), increased the risk of death by approximately threefold in CHRNB4-high expression smokers compared to CHRNB4-low expression smokers (log rank,

Indexed as

drug repurposinghead and neck squamous cell carcinoma (HNSCC)nicotineprognostic biomarkersmoking

Identifiers

PMID32455963
PMCPMC7281299
OpenAlexW3027475616

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.