Evidence map›Paper›PMID 32453769›Full record

ArticlePloS one2020

Growth study under combined effects of temperature, pH and salinity and transcriptome analysis revealed adaptations of Aspergillus terreus NTOU4989 to the extreme conditions at Kueishan Island Hydrothermal Vent Field, Taiwan.

Ka-Lai Pang, Michael Wai-Lun Chiang, Sheng-Yu Guo, Chi-Yu Shih, Hans U Dahms, Jiang-Shiou Hwang, Hyo-Jung Cha

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 45 citations in OpenAlex.

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  7. How Do Fungi Survive in the Sea and Respond to Climate Change?Journal of fungi (Basel, Switzerland) · 2022
    Review
  8. Article
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  10. Culturable Fungal Community ofJournal of fungi (Basel, Switzerland) · 2021
    Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Ka-Lai PangInstitute of Marine Biology and Centre of Excellence for the Oceans, National Taiwan Ocean University, Keelung, Taiwan.ORCID 0000-0003-4403-925X
Michael Wai-Lun ChiangDepartment of Chemistry, City University of Hong Kong, Kowloon Tong, Hong Kong.ORCID 0000-0001-7661-5560
Sheng-Yu GuoInstitute of Marine Biology and Centre of Excellence for the Oceans, National Taiwan Ocean University, Keelung, Taiwan.
Chi-Yu ShihInstitute of Marine Biology and Centre of Excellence for the Oceans, National Taiwan Ocean University, Keelung, Taiwan.
Hans U DahmsDepartment of Biomedical Science and Environment Biology, Kaohsiung Medical University, Kaohsiung, Taiwan.
Jiang-Shiou HwangInstitute of Marine Biology and Centre of Excellence for the Oceans, National Taiwan Ocean University, Keelung, Taiwan.
Hyo-Jung ChaInstitute of Marine Biology and Centre of Excellence for the Oceans, National Taiwan Ocean University, Keelung, Taiwan.
National Taiwan Ocean University · TWCity University of Hong Kong · HKKaohsiung Medical University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A high diversity of fungi was discovered on various substrates collected at the marine shallow-water Kueishan Island Hydrothermal Vent Field, Taiwan, using culture and metabarcoding methods but whether these fungi can grow and play an active role in such an extreme environment is unknown. We investigated the combined effects of different salinity, temperature and pH on growth of ten fungi (in the genera Aspergillus, Penicillium, Fodinomyces, Microascus, Trichoderma, Verticillium) isolated from the sediment and the vent crab Xenograpsus testudinatus. The growth responses of the tested fungi could be referred to three groups: (1) wide pH, salinity and temperature ranges, (2) salinity-dependent and temperature-sensitive, and (3) temperature-tolerant. Aspergillus terreus NTOU4989 was the only fungus which showed growth at 45 °C, pH 3 and 30 ‰ salinity, and might be active near the vents. We also carried out a transcriptome analysis to understand the molecular adaptations of A. terreus NTOU4989 under these extreme conditions. Data revealed that stress-related genes were differentially expressed at high temperature (45 °C); for instance, mannitol biosynthetic genes were up-regulated while glutathione S-transferase and amino acid oxidase genes down-regulated in response to high temperature. On the other hand, hydrogen ion transmembrane transport genes and phenylalanine ammonia lyase were up-regulated while pH-response transcription factor was down-regulated at pH 3, a relative acidic environment. However, genes related to salt tolerance, such as glycerol lipid metabolism and mitogen-activated protein kinase, were up-regulated in both conditions, possibly related to maintaining water homeostasis. The results of this study revealed the genetic evidence of adaptation in A. terreus NTOU4989 to changes of environmental conditions.

Indexed as

Adaptation, PhysiologicalAspergillusHydrogen-Ion ConcentrationSalinityStress, PhysiologicalTaiwanTemperatureTranscriptome

Identifiers

PMID32453769
PMCPMC7250430
OpenAlexW3029609280

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.