Evidence map›Paper›PMID 32453735›Full record

ArticlePloS one2020

Gene expression regulation by the Chromodomain helicase DNA-binding protein 9 (CHD9) chromatin remodeler is dispensable for murine development.

Andrej Alendar, Jan-Paul Lambooij, Rajith Bhaskaran, Cesare Lancini, Ji-Ying Song, Huub van Vugt, Margriet Snoek, Anton Berns

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Molecular Acrobats: How CHD Remodelers Shape the Genetic Playground to License Cell Identity.BioEssays : news and reviews in molecular, cellular and developmental biology · 2026
    Review
  3. Review
  4. Chromodomain helicase DNA-binding proteins and orofacial cleft.Journal of research in medical sciences : the official journal of Isfahan University of Medical Sciences · 2026
    Review
  5. Article
  6. Review
  7. Review
  8. Review
  9. Review
  10. CHD2-Related CNS Pathologies.International journal of molecular sciences · 2021
    Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Andrej AlendarDivision of Molecular Genetics, The Netherlands Cancer Institute, Amsterdam, The Netherlands.ORCID 0000-0001-8271-3650
Jan-Paul LambooijDivision of Molecular Genetics, The Netherlands Cancer Institute, Amsterdam, The Netherlands.
Rajith BhaskaranDivision of Molecular Genetics, The Netherlands Cancer Institute, Amsterdam, The Netherlands.
Cesare LanciniDivision of Molecular Genetics, The Netherlands Cancer Institute, Amsterdam, The Netherlands.
Ji-Ying SongDepartment of Experimental Animal Pathology, The Netherlands Cancer Institute, Amsterdam, The Netherlands.
Huub van VugtDivision of Molecular Genetics, The Netherlands Cancer Institute, Amsterdam, The Netherlands.
Margriet SnoekDivision of Molecular Genetics, The Netherlands Cancer Institute, Amsterdam, The Netherlands.ORCID 0000-0002-1904-3823
Anton BernsDivision of Molecular Genetics, The Netherlands Cancer Institute, Amsterdam, The Netherlands.ORCID 0000-0003-2194-1988
The Netherlands Cancer Institute · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chromodomain helicase DNA-binding (CHD) chromatin remodelers regulate transcription and DNA repair. They govern cell-fate decisions during embryonic development and are often deregulated in human pathologies. Chd1-8 show upon germline disruption pronounced, often developmental lethal phenotypes. Here we show that contrary to Chd1-8 disruption, Chd9-/-animals are viable, fertile and display no developmental defects or disease predisposition. Germline deletion of Chd9 only moderately affects gene expression in tissues and derived cells, whereas acute depletion in human cancer cells elicits more robust changes suggesting that CHD9 is a highly context-dependent chromatin regulator that, surprisingly, is dispensable for mouse development.

Indexed as

AnimalsCell LineCells, CulturedChromatinChromatin Assembly and DisassemblyDNA HelicasesEmbryonic DevelopmentGene Expression Regulation, DevelopmentalGene Knockout TechniquesGerm-Line MutationHumansK562 CellsMiceMouse Embryonic Stem CellsTrans-ActivatorsCHD9 protein, humanChd9 protein, mouseChromatinDNA HelicasesTrans-Activators

Identifiers

PMID32453735
PMCPMC7250415
OpenAlexW3029173999

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.