Evidence map›Paper›PMID 32453716›Full record

ArticleThe Journal of clinical investigation2020

Dysfunction of the ciliary ARMC9/TOGARAM1 protein module causes Joubert syndrome.

Brooke L Latour, Julie C Van De Weghe, Tamara Ds Rusterholz, Stef Jf Letteboer, Arianna Gomez, Ranad Shaheen, Matthias Gesemann, Arezou Karamzade, Mostafa Asadollahi, Miguel Barroso-Gil and 20 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
8.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 83 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 10 institutions in 8 countries.

Brooke L LatourDepartment of Human Genetics and Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, Netherlands.
Julie C Van De WegheDepartment of Pediatrics, University of Washington, Seattle, Washington, USA.
Tamara Ds RusterholzInstitute of Medical Genetics, and.
Stef Jf LetteboerDepartment of Human Genetics and Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, Netherlands.
Arianna GomezDepartment of Pediatrics, University of Washington, Seattle, Washington, USA.
Ranad ShaheenDepartment of Genetics, King Faisal Specialist Hospital and Research Center, Riyadh, Saudi Arabia.
Matthias GesemannDepartment of Molecular Life Sciences, University of Zurich, Zürich, Switzerland.
Arezou KaramzadeDepartment of Medical Genetics, Faculty of Medicine, Tehran University of Medical Sciences, Tehran, Iran.
Mostafa AsadollahiDepartment of Medical Genetics, Faculty of Medicine, Tehran University of Medical Sciences, Tehran, Iran.
Miguel Barroso-GilTranslational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle Upon Tyne, United Kingdom.
Manali ChitreDepartment of Paediatric Neurology, Cambridge University Hospitals NHS Foundation Trust, Cambridge, United Kingdom.
Megan E GroutDepartment of Pediatrics, University of Washington, Seattle, Washington, USA.
Jeroen van ReeuwijkDepartment of Human Genetics and Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, Netherlands.
Sylvia Ec van BeersumDepartment of Human Genetics and Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, Netherlands.
Caitlin V MillerDepartment of Pediatrics, University of Washington, Seattle, Washington, USA.
Jennifer C DempseyDepartment of Pediatrics, University of Washington, Seattle, Washington, USA.
Heba MorsyDepartment of Human Genetics, Medical Research Institute, Alexandria University, Alexandria, Egypt.
University of Washington Center for Mendelian Genomics
Michael J BamshadDepartment of Pediatrics, University of Washington, Seattle, Washington, USA.
Genomics England Research Consortium
Deborah A NickersonThe University of Washington Center for Mendelian Genomics is detailed in Supplemental Acknowledgments.
Stephan Cf NeuhaussDepartment of Molecular Life Sciences, University of Zurich, Zürich, Switzerland.
Karsten BoldtMedical Proteome Center, Institute for Ophthalmic Research, University of Tuebingen, Tuebingen, Germany.
Marius UeffingMedical Proteome Center, Institute for Ophthalmic Research, University of Tuebingen, Tuebingen, Germany.
Mohammad KeramatipourDepartment of Medical Genetics, Faculty of Medicine, Tehran University of Medical Sciences, Tehran, Iran.
John A SayerTranslational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle Upon Tyne, United Kingdom.
Fowzan S AlkurayaDepartment of Genetics, King Faisal Specialist Hospital and Research Center, Riyadh, Saudi Arabia.
Ruxandra Bachmann-GagescuInstitute of Medical Genetics, and.
Ronald RoepmanDepartment of Human Genetics and Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, Netherlands.
Dan DohertyDepartment of Pediatrics, University of Washington, Seattle, Washington, USA.
University of Washington · USRadboud University Nijmegen · NLUniversity of Zurich · CHTehran University of Medical Sciences · IRNewcastle University · GBAlexandria University · EGAlfaisal University · SACambridge University Hospitals NHS Foundation Trust · GBID Genomics (United States) · USKing Faisal Specialist Hospital & Research Centre · SA

Funding

UW Center for Mendelian GenomicsU54HG006493 · NHGRI · UNIVERSITY OF WASHINGTON · PI BAMSHAD, MICHAEL JOSEPH, NICKERSON, DEBORAH A · 2012 to 2015
$20.0M
UW Center for Mendelian GenomicsUM1HG006493 · NHGRI · UNIVERSITY OF WASHINGTON · PI BAMSHAD, MICHAEL JOSEPH, LEAL, SUZANNE M · 2016 to 2020
$15.3M
Mechanisms of Brain Dysmorphology in MN1 C-Terminal Truncation Syndrome, a Novel Intellectual Developmental Disability Disorder P50HD103524 · NICHD · UNIVERSITY OF WASHINGTON · PI Sandra E Juul · 2020 to 2026
$9.9M
Intellectual and Developmental Disabilities Research CenterU54HD083091 · NICHD · UNIVERSITY OF WASHINGTON · PI GURALNICK, MICHAEL J · 2014 to 2019
$7.9M
Identifying the missing heritability in recessive disorders using Joubert syndrome as a modelR01HD100730 · NICHD · UNIVERSITY OF WASHINGTON · PI DOHERTY, DANIEL · 2020 to 2023
$2.0M
Joubert syndrome and related disorders of hindbrain developmentR01NS064077 · NINDS · UNIVERSITY OF WASHINGTON · PI DOHERTY, DANIEL · 2010 to 2014
$1.8M
Integrating functional proteomics, genome engineering, and live-cell microscopy to the study of ciliopathiesK99HD100554 · NICHD · UNIVERSITY OF WASHINGTON · PI VAN DE WEGHE, JULIE CRAFT · 2020 to 2022
$305k
Determining the Molecular Mechanisms of Joubert Syndrome Using Patient Derived Cell LinesF32HD095599 · NICHD · UNIVERSITY OF WASHINGTON · PI VAN DE WEGHE, JULIE CRAFT · 2018 to 2019
$107k
Department of HealthNHGRI NIH HHS U54 HG006493NHGRI NIH HHS UM1 HG006493NICHD NIH HHS F32 HD095599NICHD NIH HHS K99 HD100554NICHD NIH HHS P50 HD103524NICHD NIH HHS R01 HD100730NICHD NIH HHS U54 HD083091NINDS NIH HHS R01 NS064077
6 · The paper itself

Abstract

Joubert syndrome (JBTS) is a recessive neurodevelopmental ciliopathy characterized by a pathognomonic hindbrain malformation. All known JBTS genes encode proteins involved in the structure or function of primary cilia, ubiquitous antenna-like organelles essential for cellular signal transduction. Here, we used the recently identified JBTS-associated protein armadillo repeat motif-containing 9 (ARMC9) in tandem-affinity purification and yeast 2-hybrid screens to identify a ciliary module whose dysfunction underlies JBTS. In addition to the known JBTS-associated proteins CEP104 and CSPP1, we identified coiled-coil domain containing 66 (CCDC66) and TOG array regulator of axonemal microtubules 1 (TOGARAM1) as ARMC9 interaction partners. We found that TOGARAM1 variants cause JBTS and disrupt TOGARAM1 interaction with ARMC9. Using a combination of protein interaction analyses, characterization of patient-derived fibroblasts, and analysis of CRISPR/Cas9-engineered zebrafish and hTERT-RPE1 cells, we demonstrated that dysfunction of ARMC9 or TOGARAM1 resulted in short cilia with decreased axonemal acetylation and polyglutamylation, but relatively intact transition zone function. Aberrant serum-induced ciliary resorption and cold-induced depolymerization in ARMC9 and TOGARAM1 patient cell lines suggest a role for this new JBTS-associated protein module in ciliary stability.

Indexed as

Abnormalities, MultipleArmadillo Domain ProteinsCiliaEye AbnormalitiesKidney Diseases, CysticZebrafishZebrafish ProteinsAcetylationAnimalsCerebellumCRISPR-Cas SystemsDisease Models, AnimalHumansPeptidesRetinaArmadillo Domain ProteinsARMC9 protein, zebrafishPeptidespolyglutamineZebrafish ProteinsGenetic diseasesGeneticsProteomics

Identifiers

PMID32453716
PMCPMC7410078
OpenAlexW3028932329

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.