Evidence map›Paper›PMID 32450132›Full record

ArticleMechanisms of development2020

Second heart field-specific expression of Nkx2-5 requires promoter proximal interaction with Srf.

Christopher D Clark, Kyu-Ho Lee

Open access · greenAbstract read
In one paragraph

Article in Mechanisms of development, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Right ventricle remodelling: fromJournal of molecular and cellular cardiology plus · 2025
    Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Christopher D ClarkDepartment of Pediatrics, Darby Children's Research Institute and Shawn Jenkins Children's Hospital, Medical University of South Carolina, Charleston, SC, United States of America.
Kyu-Ho LeeDepartment of Pediatrics, Darby Children's Research Institute and Shawn Jenkins Children's Hospital, Medical University of South Carolina, Charleston, SC, United States of America; Regenerative Medicine and Cell Biology Department, Medical University of South Carolina, Charleston, SC, United States of America. Electronic address: leekh@musc.edu.
Children's Research Hospital · JPMedical University of South Carolina · US

Funding

UBIQUITIN CARBOXYL TERMINAL HYDROLASE L1 (UCH-L1) AND VASCULAR LESION FORMATIONP20RR016434 · NCRR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI MARKWALD, ROGER R · 2001 to 2011
$24.8M
NCRR NIH HHS P20 RR016434
6 · The paper itself

Abstract

The cardiac homeobox transcription factor Nkx2-5 is a major determinant of cardiac identity and cardiac morphogenesis. Nkx2-5 operates as part of a complex and mutually reinforcing network of early transcription factors of the homeobox, GATA zinc finger and MADS domain families to initiate the program of cardiac development and differentiation, particularly in outflow tract precursor cells in the second heart field (SHF). We have now found evidence for another aspect of cardiac transcription factor cooperativity between Nkx2-5 and the cardiac enriched MADS domain transcription factor Srf. Specifically, Srf interaction with an evolutionarily conserved binding site in the Nkx2-5 CpG island-like proximal promoter is required for cardiac specific expression mediated by an SHF enhancer, and for combinatorial activation of these elements by cardiac transcription factors. These results provide further insight into cooperative gene regulation during cardiogenesis at the level of promoter-enhancer interactions.

Indexed as

AnimalsBinding SitesCell DifferentiationCell LineEnhancer Elements, GeneticGene Expression Regulation, DevelopmentalGenes, HomeoboxHEK293 CellsHomeobox Protein Nkx-2.5HumansMiceMice, TransgenicPromoter Regions, GeneticSerum Response FactorTranscription FactorsTranscription, GeneticHomeobox Protein Nkx-2.5Nkx2-5 protein, mouseSerum Response FactorSrf protein, mouseTranscription FactorsNkx2-5Outflow tractPromoterSrfTranscription

Identifiers

PMID32450132
PMCPMC7525830
OpenAlexW3026564323

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.