Evidence map›Paper›PMID 32449922›Full record

ArticleJournal of experimental botany2020

Homeobox transcription factor OsZHD2 promotes root meristem activity in rice by inducing ethylene biosynthesis.

Jinmi Yoon, Lae-Hyeon Cho, Wenzhu Yang, Richa Pasriga, Yunfei Wu, Woo-Jong Hong, Charlotte Bureau, Soo Jin Wi, Tao Zhang, Rongchen Wang and 6 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Zinc Finger-Homeodomain Transcriptional Factors (ZHDs) in Cucumber (International journal of molecular sciences · 2024
    Article
  10. Review
  11. Regulation of root growth and elongation in wheat.Frontiers in plant science · 2024
    Review
  12. Article
  13. Article
  14. Activated Expression of Rice DMR6-like GeneInternational journal of molecular sciences · 2023
    Article
  15. Review
  16. Article
  17. Leaf rolling in bread wheat (Frontiers in plant science · 2022
    Article
  18. Different Functions ofFrontiers in plant science · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 4 countries.

Jinmi YoonCrop Biotech Institute and Graduate School of Biotechnology, Kyung Hee University, Yongin, Korea.
Lae-Hyeon ChoCrop Biotech Institute and Graduate School of Biotechnology, Kyung Hee University, Yongin, Korea.
Wenzhu YangDepartment of Crop Genomics and Genetic Improvement, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Richa PasrigaCrop Biotech Institute and Graduate School of Biotechnology, Kyung Hee University, Yongin, Korea.
Yunfei WuCrop Biotech Institute and Graduate School of Biotechnology, Kyung Hee University, Yongin, Korea.
Woo-Jong HongCrop Biotech Institute and Graduate School of Biotechnology, Kyung Hee University, Yongin, Korea.
Charlotte BureauAgricultural Research Centre For International Development, Paris, France.
Soo Jin WiDepartment of Biology, Sunchon National University, Sunchon, Chonnam, Korea.
Tao ZhangNational Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research (Wuhan), Huazhong Agricultural University, Wuhan, China.
Rongchen WangNational Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research (Wuhan), Huazhong Agricultural University, Wuhan, China.
Dabing ZhangJoint International Research Laboratory of Metabolic & Developmental Sciences, Shanghai Jiao Tong University-University of Adelaide Joint Centre for Agriculture and Health, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University Shanghai, China.
Ki-Hong JungCrop Biotech Institute and Graduate School of Biotechnology, Kyung Hee University, Yongin, Korea.
Ky Young ParkDepartment of Biology, Sunchon National University, Sunchon, Chonnam, Korea.
Christophe PérinAgricultural Research Centre For International Development, Paris, France.
Yunde ZhaoSection of Cell and Developmental Biology, University of California San Diego, La Jolla, CA, USA.
Gynheung AnCrop Biotech Institute and Graduate School of Biotechnology, Kyung Hee University, Yongin, Korea.
Kyung Hee University · KRHuazhong Agricultural University · CNSunchon National University · KRChinese Academy of Agricultural Sciences · CNShanghai Jiao Tong University · CNUniversity of California San Diego · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Root meristem activity is the most critical process influencing root development. Although several factors that regulate meristem activity have been identified in rice, studies on the enhancement of meristem activity in roots are limited. We identified a T-DNA activation tagging line of a zinc-finger homeobox gene, OsZHD2, which has longer seminal and lateral roots due to increased meristem activity. The phenotypes were confirmed in transgenic plants overexpressing OsZHD2. In addition, the overexpressing plants showed enhanced grain yield under low nutrient and paddy field conditions. OsZHD2 was preferentially expressed in the shoot apical meristem and root tips. Transcriptome analyses and quantitative real-time PCR experiments on roots from the activation tagging line and the wild type showed that genes for ethylene biosynthesis were up-regulated in the activation line. Ethylene levels were higher in the activation lines compared with the wild type. ChIP assay results suggested that OsZHD2 induces ethylene biosynthesis by controlling ACS5 directly. Treatment with ACC (1-aminocyclopropane-1-carboxylic acid), an ethylene precursor, induced the expression of the DR5 reporter at the root tip and stele, whereas treatment with an ethylene biosynthesis inhibitor, AVG (aminoethoxyvinylglycine), decreased that expression in both the wild type and the OsZHD2 overexpression line. These observations suggest that OsZHD2 enhances root meristem activity by influencing ethylene biosynthesis and, in turn, auxin.

Indexed as

MeristemOryzaEthylenesGene Expression Regulation, PlantGenes, HomeoboxIndoleacetic AcidsPlant RootsTranscription FactorsEthylenesIndoleacetic AcidsTranscription FactorsEthylene biosynthesisgrain yieldhomeobox transcription factorlow-nutrientriceroot meristem

Identifiers

PMID32449922
PMCPMC7501826
OpenAlexW3031162498

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.