Evidence map›Paper›PMID 32449611›Full record

ArticleMolecular genetics & genomic medicine2020

The role of sodium channels in sudden unexpected death in pediatrics.

Anne M Rochtus, Richard D Goldstein, Ingrid A Holm, Catherine A Brownstein, Eduardo Pérez-Palma, Robin Haynes, Dennis Lal, Annapurna H Poduri

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 22 citations in OpenAlex.

  1. Forensic neuropathology: 2026 update.Free neuropathology · 2026
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  6. Brainstem depolarization-induced lethal apnea associated with gain-of-functionProceedings of the National Academy of Sciences of the United States of America · 2024
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  11. Genetic Landscape ofMolecular syndromology · 2022
    Article
  12. Article
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  14. Frontiers in neurology · 2021
    Review
  15. Review
  16. Genetic Factors Underlying Sudden Infant Death Syndrome.The application of clinical genetics · 2021
    Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Anne M RochtusDepartment of Neurology, Boston Children's Hospital and Harvard Medical School, Boston, MA, USA.ORCID 0000-0002-3266-9126
Richard D GoldsteinRobert's Program on Sudden Death in Pediatrics, Boston Children's Hospital, Boston, MA, USA.
Ingrid A HolmRobert's Program on Sudden Death in Pediatrics, Boston Children's Hospital, Boston, MA, USA.
Catherine A BrownsteinRobert's Program on Sudden Death in Pediatrics, Boston Children's Hospital, Boston, MA, USA.
Eduardo Pérez-PalmaGenomic Medicine Institute, Lerner Research Institute, Cleveland Clinic, Cleveland, OH, USA.
Robin HaynesRobert's Program on Sudden Death in Pediatrics, Boston Children's Hospital, Boston, MA, USA.
Dennis LalGenomic Medicine Institute, Lerner Research Institute, Cleveland Clinic, Cleveland, OH, USA.
Annapurna H PoduriDepartment of Neurology, Boston Children's Hospital and Harvard Medical School, Boston, MA, USA.ORCID 0000-0002-7350-5136
Boston Children's Hospital · USBroad Institute · USUniversity of Cologne · DE

Funding

Mouse Neurodevelopmental Behavior CoreU54HD090255 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI POMEROY, SCOTT LOREN · 2016 to 2020
$5.2M
The Hippocampus and Brainstem in the Sudden Infant Death SyndromeR01HD090064 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI HAYNES, ROBIN LYNN · 2017 to 2021
$3.2M
Genetics of Sudden Unexpected Death in PediatricsR21HD096355 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI GOLDSTEIN, RICHARD DANIEL, HOLM, INGRID ADELE · 2018 to 2019
$487k
NICHD NIH HHS R01 HD090064NICHD NIH HHS R21 HD096355NICHD NIH HHS U54 HD090255
6 · The paper itself

Abstract

backgroundSudden Unexpected Death in Pediatrics (SUDP) is a tragic event, likely caused by the complex interaction of multiple factors. The presence of hippocampal abnormalities in many children with SUDP suggests that epilepsy-related mechanisms may contribute to death, similar to Sudden Unexplained Death in Epilepsy. Because of known associations between the genes SCN1A and SCN5A and sudden death, and shared mechanisms and patterns of expression in genes encoding many voltage-gated sodium channels (VGSCs), we hypothesized that individuals dying from SUDP have pathogenic variants across the entire family of cardiac arrhythmia- and epilepsy-associated VGSC genes.

methodsTo address this hypothesis, we evaluated whole-exome sequencing data from infants and children with SUDP for variants in VGSC genes, reviewed the literature for all SUDP-associated variants in VGSCs, applied a novel paralog analysis to all variants, and evaluated all variants according to American College of Medical Genetics and Genomics (ACMG) guidelines.

resultsIn our cohort of 73 cases of SUDP, we assessed 11 variants as pathogenic in SCN1A, SCN1B, and SCN10A, genes with long-standing disease associations, and in SCN3A, SCN4A, and SCN9A, VGSC gene paralogs with more recent disease associations. From the literature, we identified 82 VGSC variants in SUDP cases. Pathogenic variants clustered at conserved amino acid sites intolerant to variation across the VGSC genes, which is unlikely to occur in the general population (p < .0001). For 54% of variants previously reported in literature, we identified conflicting evidence regarding pathogenicity when applying ACMG criteria and modern population data.

conclusionWe report variants in several VGSC genes in cases with SUDP, involving both arrhythmia- and epilepsy-associated genes. Accurate variant assessment as well as future studies are essential for an improved understanding of the contribution of sodium channel-related variants to SUDP.

Indexed as

MutationChildChild, PreschoolDeath, Sudden, CardiacExome SequencingGenetic TestingHippocampusHumansInfantSodium ChannelsSudden Infant DeathSudden Unexpected Death in EpilepsySodium Channelsarrhythmiaepilepsysodium channelsudden unexpected death

Identifiers

PMID32449611
PMCPMC7434613
OpenAlexW3026501803

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.