Evidence map›Paper›PMID 32449172›Full record

ArticleInternational journal of cancer2020

Relationship between MLH1, PMS2, MSH2 and MSH6 gene-specific alterations and tumor mutational burden in 1057 microsatellite instability-high solid tumors.

Mohamed E Salem, J Nicholas Bodor, Alberto Puccini, Joanne Xiu, Richard M Goldberg, Axel Grothey, W Michael Korn, Anthony F Shields, William M Worrilow, Edward S Kim and 3 more

Open access · greenAbstract read
In one paragraph

Article in International journal of cancer, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 95 papers.

0numbers the graph read from it
0cells of the map it votes in
95citing papers in PubMed
12.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

95 citing papers in PubMed, 162 citations in OpenAlex.

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  13. Frontiers in oncology · 2026
    Article
  14. Review
  15. Review
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  17. Therapeutic targeting of mismatch repair-deficient cancers.Nature reviews. Clinical oncology · 2025
    Review
  18. Review
  19. Article
  20. Article

35 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 9 institutions in 2 countries.

Mohamed E SalemLevine Cancer Institute, Atrium Health, Charlotte, North Carolina, USA.
J Nicholas BodorFox Chase Cancer Center, Philadelphia, Pennsylvania, USA.
Alberto PucciniKeck School of Medicine, Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, California, USA.ORCID 0000-0002-2492-4043
Joanne XiuCaris Life Sciences, Scottsdale, Arizona, USA.
Richard M GoldbergWest Virginia University Cancer Institute, Morgantown, West Virginia, USA.
Axel GrotheyWest Cancer Center, Germantown, Tennessee, USA.
W Michael KornCaris Life Sciences, Scottsdale, Arizona, USA.
Anthony F ShieldsKarmanos Cancer Institute, Detroit, Michigan, USA.
William M WorrilowLevine Cancer Institute, Atrium Health, Charlotte, North Carolina, USA.
Edward S KimLevine Cancer Institute, Atrium Health, Charlotte, North Carolina, USA.
Heinz-Josef LenzKeck School of Medicine, Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, California, USA.ORCID 0000-0001-8316-4411
John L MarshallGeorgetown Lombardi Comprehensive Cancer Center, Georgetown University, Washington, District of Columbia, USA.
Michael J HallFox Chase Cancer Center, Philadelphia, Pennsylvania, USA.
Levine Cancer Institute · USFox Chase Cancer Center · USUniversity of Southern California · USCaris Life Sciences (United States) · USGeorgetown University · USThe Barbara Ann Karmanos Cancer Institute · USUniversity of California, San Francisco · USWest Cancer Center · USWest Virginia University · US

Funding

WORD PROCESSING CENTER--COREP30CA006927 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI Dietmar J Kappes · 1985 to 2026
$138.8M
NCI NIH HHS P30 CA006927NIH HHS P30CA006927
6 · The paper itself

Abstract

Microsatellite instability-high (MSI-H) and tumor mutational burden (TMB) are predictive biomarkers for immune-checkpoint inhibitors (ICIs). Still, the relationship between the underlying cause(s) of MSI and TMB in tumors remains poorly defined. We investigated associations of TMB to mismatch repair (MMR) protein expression patterns by immunohistochemistry (IHC) and MMR mutations in a diverse sample of tumors. Hypothesized differences were identified by the protein/gene affected/mutated and the tumor histology/primary site. Overall, 1057 MSI-H tumors were identified from the 32 932 tested. MSI was examined by NGS using 7000+ target microsatellite loci. TMB was calculated using only nonsynonymous missense mutations sequenced with a 592-gene panel; a subset of MSI-H tumors also had MMR IHC performed. Analyses examined TMB by MMR protein heterodimer impacted (loss of MLH1/PMS2 vs. MSH2/MSH6 expression) and gene-specific mutations. The sample was 54.6% female; mean age was 63.5 years. Among IHC tested tumors, loss of co-expression of MLH1/PMS2 was more common (n = 544/705, 77.2%) than loss of MSH2/MSH6 (n = 81/705, 11.5%; P < .0001), and was associated with lower mean TMB (MLH1/PMS2: 25.03 mut/Mb vs MSH2/MSH6 46.83 mut/Mb; P < .0001). TMB also varied by tumor histology: colorectal cancers demonstrating MLH1/PMS2 loss had higher TMBs (33.14 mut/Mb) than endometrial cancers (20.60 mut/Mb) and other tumors (25.59 mut/Mb; P < .0001). MMR gene mutations were detected in 42.0% of tumors; among these, MSH6 mutations were most common (25.7%). MSH6 mutation patterns showed variability by tumor histology and TMB. TMB varies by underlying cause(s) of MSI and tumor histology; this heterogeneity may contribute to differences in response to ICI.

Indexed as

Microsatellite InstabilityAgedDNA-Binding ProteinsFemaleGene Expression Regulation, NeoplasticHigh-Throughput Nucleotide SequencingHumansMaleMiddle AgedMismatch Repair Endonuclease PMS2Mutation, MissenseMutL Protein Homolog 1MutS Homolog 2 ProteinNeoplasmsRetrospective StudiesSequence Analysis, DNADNA-Binding ProteinsG-T mismatch-binding proteinMismatch Repair Endonuclease PMS2MLH1 protein, humanMSH2 protein, humanMutL Protein Homolog 1MutS Homolog 2 ProteinPMS2 protein, humanimmune checkpoint inhibitorsmicrosatellite instabilitymismatch repairMSITMBtumor mutational burden

Identifiers

PMID32449172
PMCPMC7530095
OpenAlexW3026325163

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.