Evidence map›Paper›PMID 32449064›Full record

ArticleGenes & genomics2020

Genome based quantification of VHSV in multiple organs of infected olive flounder (Paralichthys olivaceus) using real-time PCR.

Hyunsu Kim, Kyung-Wan Baek, Eun-Ji Ko, Nguyen Thanh Luan, Yunjin Lim, Heyong Jin Roh, Nameun Kim, Do-Hyung Kim, Ahran Kim, Yung Hyun Choi and 4 more

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Article in Genes & genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Hyunsu KimDepartment of Parasitology and Genetics, Institute for Medical Science, Kosin University College of Medicine, Busan, S. Korea, 34, Amnam-dong, Seo-gu, Busan, 602-703, South Korea.
Kyung-Wan BaekDepartment of Parasitology and Genetics, Institute for Medical Science, Kosin University College of Medicine, Busan, S. Korea, 34, Amnam-dong, Seo-gu, Busan, 602-703, South Korea.
Eun-Ji KoDepartment of Parasitology and Genetics, Institute for Medical Science, Kosin University College of Medicine, Busan, S. Korea, 34, Amnam-dong, Seo-gu, Busan, 602-703, South Korea.
Nguyen Thanh LuanDepartment of Aquatic Life Medicine, College of Fisheries Science, Pukyong National University, Busan, Republic of Korea.
Yunjin LimDepartment of Aquatic Life Medicine, College of Fisheries Science, Pukyong National University, Busan, Republic of Korea.
Heyong Jin RohDepartment of Aquatic Life Medicine, College of Fisheries Science, Pukyong National University, Busan, Republic of Korea.
Nameun KimDepartment of Aquatic Life Medicine, College of Fisheries Science, Pukyong National University, Busan, Republic of Korea.
Do-Hyung KimDepartment of Aquatic Life Medicine, College of Fisheries Science, Pukyong National University, Busan, Republic of Korea.
Ahran KimDepartment of Chemistry, Center for Proteome Biophysics, and Chemistry Institute for Functional Materials, Pusan National University, Busan, Republic of Korea.
Yung Hyun ChoiDepartment of Biochemistry, College of Oriental Medicine, Dongeui University, Busan, Republic of Korea.
Suhkmann KimDepartment of Chemistry, College of Natural Sciences, Pusan National University, Busan, Republic of Korea.
Heui-Soo KimDepartment of Biological Sciences, College of Natural Sciences, Pusan National University, Busan, Republic of Korea.
Mee Sun OckDepartment of Parasitology and Genetics, Institute for Medical Science, Kosin University College of Medicine, Busan, S. Korea, 34, Amnam-dong, Seo-gu, Busan, 602-703, South Korea.
Hee-Jae ChaDepartment of Parasitology and Genetics, Institute for Medical Science, Kosin University College of Medicine, Busan, S. Korea, 34, Amnam-dong, Seo-gu, Busan, 602-703, South Korea. hcha@kosin.ac.kr.ORCID 0000-0002-6963-2685
Pukyong National University · KRPusan National University · KRKosin University · KRDong-Eui University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundViral hemorrhagic septicemia (VHS) is a serious viral disease that infects the olive flounder in South Korea. The Korean aquaculture industry experienced an economic loss caused by the high infectivity and mortality.

objectiveThis study aimed to evaluate the infection density of VHSV in various organs of the olive flounder including spleen, liver, kidney, stomach, esophagus, intestine, gill, muscle, heart, and brain. Olive flounders were collected from a local fish farm and injected subcutaneously with 10

methodsEach 15 fish were sampled at 0, 3, and 7 days post challenge (dpc), respectively, to perform quantitative analysis of VHSV using SYBR-green based real-time PCR in various tissues including spleen, liver, head-kidney, body-kidney, muscle, esophagus, stomach, intestine, gill, and brain.

resultsOrgans infected with VHSV were obtained after 3 and 7 days. Each organs were examined for viral infection using real-time PCR. The data obtained from this experiment revealed copy numbers higher than 10 copies per 100 ng cDNA in the spleen (15.26 ± 3.11 copies/100 ng of cDNA), muscle (11.24 ± 2.25 copies), and gill (14.23 ± 6.26 copies), but lower in liver, head-kidney, body-kidney, esophagus, brain and stomach.

conclusionThe present study, together with previous data, demonstrated that the gill, spleen, and muscle are the major target organs of VHSV in olive flounder. Therefore, central monitoring of spleen, gill and muscle should be considered and might be necessary if anti-VHSV treatment is to be successful in infected olive flounder.

Indexed as

Viral LoadAnimalsFlounderHemorrhagic Septicemia, ViralNovirhabdovirusOrgan SpecificityReal-Time Polymerase Chain ReactionCopy numberOlive flounderReal-time PCRTarget organVHSV

Identifiers

PMID32449064
OpenAlexW3026598054

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.