Evidence map›Paper›PMID 32448141›Full record

ArticleBMC genetics2020

An IL17RA frameshift variant in a Holstein cattle family with psoriasis-like skin alterations and immunodeficiency.

Irene M Häfliger, Marlene Sickinger, Mark Holsteg, Leif M Raeder, Manfred Henrich, Siegfried Marquardt, Cord Drögemüller, Gesine Lühken

Abstract readCase Reports
In one paragraph

Article in BMC genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Novel functional sequences uncovered through a bovine multiassembly graph.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Irene M HäfligerInstitute of Genetics, Vetsuisse Faculty, University of Bern, 3001, Bern, Switzerland.
Marlene SickingerClinic for Obstetrics, Gynecology and Andrology of Large and Small Animals with Ambulatory Service, Faculty of Veterinary Medicine, Justus-Liebig University Giessen, 35392, Giessen, Germany.
Mark HolstegBovine Health Service, Chamber of Agriculture of North Rhine-Westphalia, 59505, Bad Sassendorf, Germany.
Leif M RaederInstitute of Veterinary Pathology, Faculty of Veterinary Medicine, Justus-Liebig-University Giessen, 35392, Giessen, Germany.
Manfred HenrichInstitute of Veterinary Pathology, Faculty of Veterinary Medicine, Justus-Liebig-University Giessen, 35392, Giessen, Germany.
Siegfried MarquardtVeterinary Sharing Practice, Dr. Siegfried Marquardt and Peter Walter, 47574, Goch, Germany.
Cord DrögemüllerInstitute of Genetics, Vetsuisse Faculty, University of Bern, 3001, Bern, Switzerland. cord.droegemueller@vetsuisse.unibe.ch.ORCID 0000-0001-9773-522X
Gesine LühkenInstitute of Animal Breeding and Genetics, Faculty of Agricultural Sciences, Nutritional Sciences and Environmental Management, Justus-Liebig University Giessen, 35390, Giessen, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSkin lesions and dermatoses in cattle are often associated with infections due to bacteria, fungi or environmental risk factors. Dermatoses with genetic etiology have been described in cattle. Among these rare disorders, there are primary congenital dermatoses that are associated with inherited nutritional deficiencies, such as bovine hereditary zinc deficiency or zinc deficiency-like syndrome. This study presents three cases of Holstein cattle with congenital skin lesions observed on a single farm that resemble zinc deficiency-like syndrome. Close clinical and pathological examinations took place in two cases. Pedigree analysis indicated autosomal recessive inheritance and whole-genome sequencing of both affected calves was performed.

resultsThe two calves showed retarded growth and suffered from severe ulcerative dermatitis with hyperkeratosis, alopecia furunculosis and subcutaneous abscess formation. Blood analysis showed correspondent leukocytosis with neutrophilia whereas minerals, macro- and micronutrients were within the reference ranges. Variant calling and filtering against the 1000 Bull Genomes variant catalogue resulted in the detection of a single homozygous protein-changing variant exclusively present in both sequenced genomes. This single-nucleotide deletion in exon 3 of IL17RA on bovine chromosome 5 was predicted to have a deleterious impact on the encoded protein due to a frameshift leading to a truncated gene product. Genotyping of the affected cattle family confirmed recessive inheritance.

conclusionsA loss-of-function mutation of the IL17RA transmembrane protein could be identified as most likely pathogenic variant for the psoriasis-like skin alterations observed in the two affected Holstein calves. In man, rare recessive diseases associated with IL17RA include immunodeficiency 51 and chronic mucocutaneous candidiasis. This supports the observed immunodeficiency of the presented cases. This study reports the first naturally occurring IL17RA-associated animal model.

Indexed as

Frameshift MutationAmino Acid SequenceAnimalsCattleCattle DiseasesFemaleGenes, RecessiveGenotypeMalePedigreePsoriasisReceptors, Interleukin-17Receptors, Interleukin-17CattleGenetic disorderInterleukin 17 receptor aMendelianMonogenicPrecision medicineRare diseaseSkin disorder

Identifiers

PMID32448141
PMCPMC7247147

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.