Evidence map›Paper›PMID 32447589›Full record

ArticleVirus genes2020

Analysis of viruses present in urine from patients with interstitial cystitis.

Maria Teresa Sáenz Robles, Paul G Cantalupo, Alexis M Duray, Melissa Freeland, Michelle Murkowski, Adrie van Bokhoven, Alisa J Stephens-Shields, James M Pipas, Michael J Imperiale

Open access · greenAbstract read
In one paragraph

Article in Virus genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

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  10. Journal of virology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Maria Teresa Sáenz RoblesDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, PA, USA.
Paul G CantalupoDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, PA, USA.
Alexis M DurayDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, PA, USA.
Melissa FreelandDepartment of Microbiology and Immunology, University of Michigan, Ann Arbor, MI, USA.
Michelle MurkowskiDepartment of Microbiology and Immunology, University of Michigan, Ann Arbor, MI, USA.
Adrie van BokhovenDepartment of Pathology, University of Colorado, Aurora, CO, USA.
Alisa J Stephens-ShieldsDepartment of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania Perlman School of Medicine, Philadelphia, PA, USA.
James M PipasDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, PA, USA.
Michael J ImperialeDepartment of Microbiology and Immunology, University of Michigan, Ann Arbor, MI, USA. imperial@umich.edu.ORCID http://orcid.org/0000-0003-1218-6458
University of Pittsburgh · USUniversity of Michigan · USUniversity of Colorado Anschutz Medical Campus · USUniversity of Pennsylvania · US

Funding

MAPP Research NetworkU01DK082316 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI LANDIS, J RICHARD · 2008 to 2018
$17.2M
Role of CNS in Modulation of Pelvic Pain SyndromeU01DK082342 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI KLUMPP, DAVID J · 2008 to 2021
$10.5M
Urology Chronic Pelvic Pain Longitudinal Symptom Patterns StudyU01DK082344 · NIDDK · UNIVERSITY OF IOWA · PI KREDER, KARL J · 2008 to 2021
$9.8M
University of Michigan MAPP Research Network Discovery SiteU01DK082345 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CLAUW, DANIEL J, CLEMENS, J. QUENTIN · 2008 to 2021
$9.7M
Neurobiological endophenotypes & gene-environment interactions in IC/PBS & in aU01DK082370 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KUTCH, JASON J., MAYER, EMERAN A · 2008 to 2021
$9.2M
WSU Urologic Chronic Pelvic Pain Syndromes Discovery CenterU01DK082325 · NIDDK · WASHINGTON STATE UNIVERSITY · PI BOGIC, MARIJA · 2008 to 2021
$9.0M
Washington University MAPP Network Discovery SiteU01DK082315 · NIDDK · WASHINGTON UNIVERSITY · PI LAI, HING HUNG HENRY · 2008 to 2021
$9.0M
MAPP Research Network Tissue Analysis and Technology CoreU01DK082333 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI LUCIA, M. SCOTT · 2008 to 2018
$6.1M
Limited Competition for Continuation of the MAPP-RN DCCU24DK082316 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI LANDIS, J RICHARD · 2019 to 2021
$4.9M
MAPP Research Network Tissue Analysis and Technology CoreU24DK082333 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI LUCIA, M. SCOTT · 2019 to 2021
$390k
NIDDK NIH HHS DK82315NIDDK NIH HHS DK82316)NIDDK NIH HHS DK82325NIDDK NIH HHS DK82333NIDDK NIH HHS DK82342NIDDK NIH HHS DK82344NIDDK NIH HHS DK82345NIDDK NIH HHS DK82370NIDDK NIH HHS U01 DK082315NIDDK NIH HHS U01 DK082316NIDDK NIH HHS U01 DK082325NIDDK NIH HHS U01 DK082333NIDDK NIH HHS U01 DK082342NIDDK NIH HHS U01 DK082344NIDDK NIH HHS U01 DK082345NIDDK NIH HHS U01 DK082370NIDDK NIH HHS U24 DK082316NIDDK NIH HHS U24 DK082333
6 · The paper itself

Abstract

The question of whether some cases of interstitial cystitis may have an infectious etiology has been debated for some time. Previous studies have looked for the presence of certain specific viruses, but generally did not use the types of sensitive and unbiased approaches that are currently available. As part of the MAPP (Multidisciplinary Approach to the Study of Chronic Pelvic Pain) Research Network, we examined urine specimens from interstitial cystitis patients who provided specimens over time and also reported various symptoms at the time of urine collection. We first performed next-generation sequencing to look for the presence of viruses in urines, and detected two human polyomaviruses that are known to be excreted into urine, BKPyV and JCPyV. We were especially interested in BKPyV because it is a known cause of another bladder disease, hemorrhagic cystitis, in bone marrow transplant recipients. Further analysis of individual samples indicates a trend toward higher excretion of polyomaviruses in patients experiencing increased symptoms.

Indexed as

Cystitis, InterstitialFemaleHigh-Throughput Nucleotide SequencingHumansMalePolyomavirusPolyomavirus InfectionsTumor Virus InfectionsInterstitial cystitisNGSPCRPolyomavirusVirus discovery

Identifiers

PMID32447589
PMCPMC7339973
OpenAlexW3026556270

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.