Evidence map›Paper›PMID 32447499›Full record

ArticleMolecular biology reports2020

Genetic relationship and nuclear dna content variation in Tef [Eragrostis tef (Zucc.) Trotter] accessions.

Caglar Kaya, Iskender Tiryaki, Ugur Sari, Metin Tuna

Abstract read
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In one paragraph

Article in Molecular biology reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Caglar KayaDepartment of Agricultural Biotechnology, Faculty of Agriculture, Canakkale Onsekiz Mart University, Terzioglu Campus, 17000, Canakkale, Turkey.
Iskender TiryakiDepartment of Agricultural Biotechnology, Faculty of Agriculture, Canakkale Onsekiz Mart University, Terzioglu Campus, 17000, Canakkale, Turkey. tiryaki46@yahoo.com.ORCID http://orcid.org/0000-0002-7504-2892
Ugur SariDepartment of Agricultural Biotechnology, Faculty of Agriculture, Canakkale Onsekiz Mart University, Terzioglu Campus, 17000, Canakkale, Turkey.
Metin TunaDepartment of Field Crops, Faculty of Agriculture, Namik Kemal University, 59030, Tekirdag, Turkey.
Çanakkale Onsekiz Mart Üniversitesi · TRTekirdağ Namık Kemal University · TR

Funding

Çanakkale Onsekiz Mart Üniversitesi FYL-2019-2834
6 · The paper itself

Abstract

This study was initiated to reveal genetic relationship of 25 tef (Eragrostis tef (Zucc.) accessions by using 10 SSR markers and to determine DNA content variation by using flow cytometer analysis. Ten markers produced a total of 18 alleles and 11 of those were polymorphic. The mean polymorphism rate was 66.6%. The highest polymorphism information content value was obtained from marker CNLTs370 with 0.69 while markers CNTLs11 and CNTLs133 produced monomorphic bands only. UPGMA analysis divided 25 tef genotypes into three main clades. The accessions PI193511 and PI195934 were distinctly separated from the others. No ploidy differences were determined among the 25 tef accessions. 2C mean nuclear DNA content ranged from 1.406 pg to 1.510 with mean of 1.460 pg. The results of this study indicated that SSR markers successfully determined genetic relationship of 25 tef accession although they had a low rate of polymorphism. This study also revealed that available tef related SSR markers should be optimized before use and their efficiency may vary based on tef genotypes or accessions used.

Indexed as

AllelesDatabases, GeneticDNAEragrostisFlow CytometryGene Expression ProfilingGenes, PlantGenetic MarkersGenetic VariationGenotypeMicrosatellite RepeatsPolymorphism, GeneticTranscriptomeDNAGenetic MarkersDNAFlow cytometryPloidySSRTef

Identifiers

PMID32447499
OpenAlexW3026132303

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.