Evidence map›Paper›PMID 32447424›Full record

ArticleAnnals of hematology2020

Functional polymorphisms of BCL11A and HBS1L-MYB genes affect both fetal hemoglobin level and clinical outcomes in a cohort of children with sickle cell anemia.

Rahyssa Rodrigues Sales, André Rolim Belisário, Gabriela Faria, Fabiola Mendes, Marcelo Rizzatti Luizon, Marcos Borato Viana

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In one paragraph

Article in Annals of hematology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. Pooled it
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  5. Article
  6. Review
  7. Review
  8. Article
  9. Transcriptional regulators of fetal hemoglobin.Hematology, transfusion and cell therapy · 2024
    Review
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  17. Genotypic Diversity among Angolan Children with Sickle Cell Anemia.International journal of environmental research and public health · 2021
    Article
  18. Review
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Rahyssa Rodrigues SalesPrograma de Pós-Graduação em Genética, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais (UFMG), Belo Horizonte, Minas Gerais, Brazil. rahyssar.sales@gmail.com.ORCID https://orcid.org/0000-0001-8197-850X
André Rolim BelisárioCentro de Tecidos Biológicos de Minas Gerais, Fundação Hemominas, Lagoa Santa, Minas Gerais, 33400-000, Brazil.ORCID https://orcid.org/0000-0003-0166-4258
Gabriela FariaServiço de Pesquisa, Fundação Hemominas, Belo Horizonte, Minas Gerais, Brazil.
Fabiola MendesServiço de Pesquisa, Fundação Hemominas, Belo Horizonte, Minas Gerais, Brazil.
Marcelo Rizzatti LuizonPrograma de Pós-Graduação em Genética, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais (UFMG), Belo Horizonte, Minas Gerais, Brazil.ORCID https://orcid.org/0000-0002-8331-3525
Marcos Borato VianaFaculdade de Medicina/NUPAD, Universidade Federal de Minas Gerais (UFMG), Belo Horizonte, Minas Gerais, Brazil.ORCID https://orcid.org/0000-0001-9665-2115
Fundação Centro de Hematologia e Hemoterapia de Minas Gerais · BRUniversidade Federal de Minas Gerais · BR

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 305261/2017-7
6 · The paper itself

Abstract

Fetal hemoglobin (HbF) ameliorates clinical severity of sickle cell anemia (SCA). The major loci regulating HbF levels are HBB cluster, BCL11A, and HMIP-2 (HBS1L-MYB). However, the impact of noncoding single-nucleotide polymorphisms (SNPs) in these loci on clinical outcomes and their functional role on regulating HbF levels should be better elucidated. Therefore, we performed comprehensive association analyses of 14 noncoding SNPs in five loci with HbF levels and with clinical outcomes in a cohort of 250 children with SCA from Southeastern Brazil, and further performed functional annotation of these SNPs. We found SNPs independently associated with HbF levels: rs4671393 in BCL11A (β-coefficient = 0.28), rs9399137 in HMIP-2A (β-coefficient = 0.16), and rs4895441 in HMIP-2B (β-coefficient = 0.15). Patients carrying minor (HbF-boosting) alleles for rs1427407, rs93979137, rs4895441, rs9402686, and rs9494145 showed reduced count of reticulocytes (p < 0.01), while those carrying the T allele of rs9494145 showed lower white blood cell count (p = 0.002). Carriers of the minor allele for rs9402686 showed higher peripheral saturation of oxygen (p = 0.002). Patients carrying minor alleles in BCL11A showed lower risk of transfusion incidence rate ratio (IRR ≥ 1.3; p < 0.0001). This effect was independent of HbF effect (p = 0.005). Carriers of minor alleles for rs9399137 and rs9402686 showed lower risk of acute chest syndrome (IRR > 1.3; p ≤ 0.01). Carriers of the reference allele for rs4671393 showed lower risk of infections (IRR = 1.16; p = 0.01). In conclusion, patients carrying HbF-boosting alleles of BCL11A and HMIP-2 were associated with milder clinical phenotypes. Higher HbF concentration may underlie this effect.

Indexed as

Genes, mybPolymorphism, Single NucleotideAllelesAnemia, Sickle CellBrazilChildChild, PreschoolCohort StudiesFemaleFetal HemoglobinGenetic Predisposition to DiseaseGenome-Wide Association StudyGTP-Binding ProteinsHumansInfantInfant, NewbornBCL11A protein, humanFetal HemoglobinGTP-Binding ProteinsHBS1L protein, humanRepressor ProteinsBCL11A geneClinical outcomesFetal hemoglobinHBB geneHBS1L-MYB geneSickle cell anemiaSingle-nucleotide polymorphisms (SNPs)

Identifiers

PMID32447424
OpenAlexW3026671369

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.