Evidence map›Paper›PMID 32444859›Full record

ArticleCommunications biology2020

Transcriptional profiling of lung macrophages identifies a predictive signature for inflammatory lung disease in preterm infants.

Debashis Sahoo, Livia S Zaramela, Gilberto E Hernandez, Uyen Mai, Sahar Taheri, Dharanidhar Dang, Ashley N Stouch, Rachel M Medal, Alyssa M McCoy, Judy L Aschner and 3 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Article
  3. Modulation of alveolar macrophages by sex as a biological variable.American journal of physiology. Lung cellular and molecular physiology · 2026
    Article
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  18. Single-Cell Profiling of Premature Neonate Airways Reveals a Continuum of Myeloid Differentiation.American journal of respiratory cell and molecular biology · 2023
    Article
  19. Article
  20. AMPK Activation: Respiratory Panacea?American journal of respiratory cell and molecular biology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Debashis SahooDepartment of Pediatrics, Rady Children's Hospital, University of California, San Diego, La Jolla, CA, 92093, USA.ORCID http://orcid.org/0000-0003-2329-8228
Livia S ZaramelaDepartment of Pediatrics, Rady Children's Hospital, University of California, San Diego, La Jolla, CA, 92093, USA.
Gilberto E HernandezDepartment of Pediatrics, Rady Children's Hospital, University of California, San Diego, La Jolla, CA, 92093, USA.
Uyen MaiDepartment of Pediatrics, Rady Children's Hospital, University of California, San Diego, La Jolla, CA, 92093, USA.
Sahar TaheriDepartment of Pediatrics, Rady Children's Hospital, University of California, San Diego, La Jolla, CA, 92093, USA.
Dharanidhar DangDepartment of Pediatrics, Rady Children's Hospital, University of California, San Diego, La Jolla, CA, 92093, USA.
Ashley N StouchDepartment of Pediatrics, Rady Children's Hospital, University of California, San Diego, La Jolla, CA, 92093, USA.
Rachel M MedalDepartment of Pediatrics, Rady Children's Hospital, University of California, San Diego, La Jolla, CA, 92093, USA.
Alyssa M McCoyDepartment of Pediatrics, Rady Children's Hospital, University of California, San Diego, La Jolla, CA, 92093, USA.
Judy L AschnerDepartment of Pediatrics, Joseph M Sanzari Children's Hospital, Hackensack University Medical Center, Hackensack Meridian School of Medicine at Seton Hall, Hackensack, NJ, 07110, USA.
Timothy S BlackwellDepartments of Medicine, Cancer Biology, and Developmental Cell Biology, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA.
Karsten ZenglerDepartment of Pediatrics, Rady Children's Hospital, University of California, San Diego, La Jolla, CA, 92093, USA.ORCID http://orcid.org/0000-0002-8062-3296
Lawrence S PrinceDepartment of Pediatrics, Rady Children's Hospital, University of California, San Diego, La Jolla, CA, 92093, USA. lprinceucsd@gmail.com.ORCID http://orcid.org/0000-0002-7010-4548
University of California San Diego · USHackensack University Medical Center · USVanderbilt University · US

Funding

Role of Fetal Lung Macrophages in Broncopulmonary DysplasiaR01HL097195 · NHLBI · VANDERBILT UNIVERSITY · PI BLACKWELL, TIMOTHY S., PRINCE, LAWRENCE S · 2009 to 2013
$2.6M
Improving Prematurity-related Respiratory Outcomes at Vanderbilt (IMPROV)U01HL101456 · NHLBI · VANDERBILT UNIVERSITY · PI ASCHNER, JUDY LYNN · 2010 to 2014
$2.4M
Transcriptional Control of Lung Macrophage DevelopmentR01HL126703 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HOFFMAN, HAROLD M, PRINCE, LAWRENCE S · 2015 to 2018
$1.6M
NHLBI NIH HHS HL097195NHLBI NIH HHS HL101456NHLBI NIH HHS HL126703NHLBI NIH HHS R01 HL097195NHLBI NIH HHS R01 HL126703NHLBI NIH HHS U01 HL101456The Gerber Foundation 1823-3830The Gerber Foundation 20180324
6 · The paper itself

Abstract

Lung macrophages mature after birth, placing newborn infants, particularly those born preterm, within a unique window of susceptibility to disease. We hypothesized that in preterm infants, lung macrophage immaturity contributes to the development of bronchopulmonary dysplasia (BPD), the most common serious complication of prematurity. By measuring changes in lung macrophage gene expression in preterm patients at risk of BPD, we show here that patients eventually developing BPD had higher inflammatory mediator expression even on the first day of life. Surprisingly, the ex vivo response to LPS was similar across all samples. Our analysis did however uncover macrophage signature genes whose expression increased in the first week of life specifically in patients resilient to disease. We propose that these changes describe the dynamics of human lung macrophage differentiation. Our study therefore provides new mechanistic insight into both neonatal lung disease and human developmental immunology.

Indexed as

Gene Expression RegulationGene Regulatory NetworksTranscriptomeBiomarkersBronchopulmonary DysplasiaGestational AgeHumansInfant, NewbornInfant, PrematureMacrophagesPneumoniaBiomarkers

Identifiers

PMID32444859
PMCPMC7244484
OpenAlexW3027457345

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.