Evidence map›Paper›PMID 32444811›Full record

ArticleThe ISME journal2020

Diverse coral reef invertebrates exhibit patterns of phylosymbiosis.

Paul A O'Brien, Shangjin Tan, Chentao Yang, Pedro R Frade, Nikos Andreakis, Hillary A Smith, David J Miller, Nicole S Webster, Guojie Zhang, David G Bourne

Abstract read
In one paragraph

Article in The ISME journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
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  9. bioRxiv : the preprint server for biology · 2025
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  15. The hindgut microbiota of coconut rhinoceros beetles (Applied and environmental microbiology · 2024
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  20. The role of animal hosts in shaping gut microbiome variation.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Paul A O'BrienCollege of Science and Engineering, James Cook University, Townsville, QLD, Australia.
Shangjin TanBGI-Shenzhen, Beishan Industrial Zone, Shenzhen, 518083, China.
Chentao YangBGI-Shenzhen, Beishan Industrial Zone, Shenzhen, 518083, China.ORCID http://orcid.org/0000-0003-3447-2316
Pedro R FradeCentre of Marine Sciences, University of Algarve, Faro, Portugal.
Nikos AndreakisCollege of Science and Engineering, James Cook University, Townsville, QLD, Australia.
Hillary A SmithCollege of Science and Engineering, James Cook University, Townsville, QLD, Australia.
David J MillerCentre for Tropical Bioinformatics and Molecular Biology, James Cook University, Townsville, QLD, Australia.ORCID http://orcid.org/0000-0003-0291-9531
Nicole S WebsterAustralian Institute of Marine Science, Townsville, QLD, Australia.ORCID http://orcid.org/0000-0002-4753-5278
Guojie ZhangBGI-Shenzhen, Beishan Industrial Zone, Shenzhen, 518083, China. zhanggj@genomics.cn.
David G BourneCollege of Science and Engineering, James Cook University, Townsville, QLD, Australia. david.bourne@jcu.edu.au.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbiome assemblages of plants and animals often show a degree of correlation with host phylogeny; an eco-evolutionary pattern known as phylosymbiosis. Using 16S rRNA gene sequencing to profile the microbiome, paired with COI, 18S rRNA and ITS1 host phylogenies, phylosymbiosis was investigated in four groups of coral reef invertebrates (scleractinian corals, octocorals, sponges and ascidians). We tested three commonly used metrics to evaluate the extent of phylosymbiosis: (a) intraspecific versus interspecific microbiome variation, (b) topological comparisons between host phylogeny and hierarchical clustering (dendrogram) of host-associated microbial communities, and (c) correlation of host phylogenetic distance with microbial community dissimilarity. In all instances, intraspecific variation in microbiome composition was significantly lower than interspecific variation. Similarly, topological congruency between host phylogeny and the associated microbial dendrogram was more significant than would be expected by chance across all groups, except when using unweighted UniFrac distance (compared with weighted UniFrac and Bray-Curtis dissimilarity). Interestingly, all but the ascidians showed a significant positive correlation between host phylogenetic distance and associated microbial dissimilarity. Our findings provide new perspectives on the diverse nature of marine phylosymbioses and the complex roles of the microbiome in the evolution of marine invertebrates.

Indexed as

Coral ReefsSymbiosisAnimalsInvertebratesPhylogenyRNA, Ribosomal, 16SRNA, Ribosomal, 16S

Identifiers

PMID32444811
PMCPMC7608455

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.