Evidence map›Paper›PMID 32440369›Full record

ArticleProceedings of the ... SIAM International Conference on Data Mining. SIAM International Conference on Data Mining2020

GRIA: Graphical Regularization for Integrative Analysis.

Changgee Chang, Jihwan Oh, Qi Long

Abstract read
In one paragraph

Article in Proceedings of the ... SIAM International Conference on Data Mining. SIAM International Conference on Data Mining, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Changgee ChangDepartment of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania.
Jihwan OhDepartment of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania.
Qi LongDepartment of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania.

Funding

Advancing Analysis of Multi-omics Data in Alzheimer's Disease ResearchRF1AG063481 · NIA · UNIVERSITY OF PENNSYLVANIA · PI LONG, QI · 2019 to 2020
$3.8M
Privacy-preserving methods and tools for handling missing data in distributed health data networksR01GM124111 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI LONG, QI · 2017 to 2020
$2.3M
NIA NIH HHS RF1 AG063481NIGMS NIH HHS R01 GM124111
6 · The paper itself

Abstract

Integrative analysis jointly analyzes multiple data sets to overcome curse of dimensionality. It can detect important but weak signals by jointly selecting features for all data sets, but unfortunately the sets of important features are not always the same for all data sets. Variations which allows heterogeneous sparsity structure-a subset of data sets can have a zero coefficient for a selected feature-have been proposed, but it compromises the effect of integrative analysis recalling the problem of losing weak important signals. We propose a new integrative analysis approach which not only aggregates weak important signals well in homogeneity setting but also substantially alleviates the problem of losing weak important signals in heterogeneity setting. Our approach exploits a priori known graphical structure of features by forcing joint selection of adjacent features, and integrating such information over multiple data sets can increase the power while taking into account the heterogeneity across data sets. We confirm the problem of existing approaches and demonstrate the superiority of our method through a simulation study and an application to gene expression data from ADNI.

Identifiers

PMID32440369
PMCPMC7241091

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.