Evidence map›Paper›PMID 32439795›Full record

ArticleScience (New York, N.Y.)2020

Ion transport and regulation in a synaptic vesicle glutamate transporter.

Fei Li, Jacob Eriksen, Janet Finer-Moore, Roger Chang, Phuong Nguyen, Alisa Bowen, Alexander Myasnikov, Zanlin Yu, David Bulkley, Yifan Cheng and 2 more

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 90 citations in OpenAlex.

  1. Review
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  15. Phospholipids Differentially Regulate CaACS chemical biology · 2024
    Article
  16. Article
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  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Fei LiDepartment of Biochemistry and Biophysics, University of California San Francisco (UCSF) School of Medicine, San Francisco, CA, USA.ORCID 0000-0003-0720-3129
Jacob EriksenDepartments of Neurology and Physiology, UCSF School of Medicine, San Francisco, CA, USA.ORCID 0000-0003-0726-9769
Janet Finer-MooreDepartment of Biochemistry and Biophysics, University of California San Francisco (UCSF) School of Medicine, San Francisco, CA, USA.
Roger ChangDepartments of Neurology and Physiology, UCSF School of Medicine, San Francisco, CA, USA.
Phuong NguyenDepartment of Biochemistry and Biophysics, University of California San Francisco (UCSF) School of Medicine, San Francisco, CA, USA.
Alisa BowenDepartment of Biochemistry and Biophysics, University of California San Francisco (UCSF) School of Medicine, San Francisco, CA, USA.ORCID 0000-0002-8518-6697
Alexander MyasnikovDepartment of Biochemistry and Biophysics, University of California San Francisco (UCSF) School of Medicine, San Francisco, CA, USA.ORCID 0000-0003-2607-7121
Zanlin YuDepartment of Biochemistry and Biophysics, University of California San Francisco (UCSF) School of Medicine, San Francisco, CA, USA.ORCID 0000-0001-8381-8788
David BulkleyDepartment of Biochemistry and Biophysics, University of California San Francisco (UCSF) School of Medicine, San Francisco, CA, USA.ORCID 0000-0002-2535-904X
Yifan ChengDepartment of Biochemistry and Biophysics, University of California San Francisco (UCSF) School of Medicine, San Francisco, CA, USA.ORCID 0000-0001-9535-0369
Robert H EdwardsDepartments of Neurology and Physiology, UCSF School of Medicine, San Francisco, CA, USA. stroud@msg.ucsf.edu robert.edwards@ucsf.edu.ORCID 0000-0002-8650-3260
Robert M StroudDepartment of Biochemistry and Biophysics, University of California San Francisco (UCSF) School of Medicine, San Francisco, CA, USA. stroud@msg.ucsf.edu robert.edwards@ucsf.edu.ORCID 0000-0003-2083-5665
University of California, San Francisco · USHoward Hughes Medical Institute · US

Funding

PREDOCTORAL TRAINING IN BIOMEDICAL SCIENCEST32GM008568 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ANSEL, KARL MARK · 1995 to 2019
$6.3M
Structural Basis of Vesicular Neurotransmitter TransportR01NS089713 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI EDWARDS, ROBERT H, STROUD, ROBERT M · 2015 to 2023
$5.8M
TRANSPORT OF NEUROTRANSMITTERS INTO SYNAPTIC VESICLESR01MH050712 · NIMH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI EDWARDS, ROBERT H · 1993 to 2011
$3.8M
Transport of Neurotransmitter Into Synaptic VesiclesR37MH050712 · NIMH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI EDWARDS, ROBERT H · 2012 to 2020
$3.5M
Acquisition of an electron microscope for high-resolution single particle cryo-EMS10OD021741 · OD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHENG, YIFAN · 2016 to 2016
$2.0M
Linux cluster for near atomic resolution single particle cryo-EMS10OD020054 · OD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHENG, YIFAN · 2015 to 2015
$456k
Structural Basis of Quantal ReleaseK99MH119591 · NIMH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LI, FEI · 2019 to 2020
$242k
Howard Hughes Medical InstituteNIGMS NIH HHS T32 GM008568NIH HHS S10 OD020054NIH HHS S10 OD021741NIMH NIH HHS K99 MH119591NIMH NIH HHS R01 MH050712NIMH NIH HHS R37 MH050712NINDS NIH HHS R01 NS089713
6 · The paper itself

Abstract

Synaptic vesicles accumulate neurotransmitters, enabling the quantal release by exocytosis that underlies synaptic transmission. Specific neurotransmitter transporters are responsible for this activity and therefore are essential for brain function. The vesicular glutamate transporters (VGLUTs) concentrate the principal excitatory neurotransmitter glutamate into synaptic vesicles, driven by membrane potential. However, the mechanism by which they do so remains poorly understood owing to a lack of structural information. We report the cryo-electron microscopy structure of rat VGLUT2 at 3.8-angstrom resolution and propose structure-based mechanisms for substrate recognition and allosteric activation by low pH and chloride. A potential permeation pathway for chloride intersects with the glutamate binding site. These results demonstrate how the activity of VGLUTs can be coordinated with large shifts in proton and chloride concentrations during the synaptic vesicle cycle to ensure normal synaptic transmission.

Indexed as

Allosteric RegulationAmino Acid SequenceAnimalsBinding SitesChloride ChannelsChloridesCryoelectron MicroscopyGlutamic AcidHydrogen-Ion ConcentrationIon TransportMembrane PotentialsProtein DomainsRatsSynaptic VesiclesVesicular Glutamate Transport Protein 2Chloride ChannelsChloridesGlutamic AcidSlc17a6 protein, ratVesicular Glutamate Transport Protein 2

Identifiers

PMID32439795
PMCPMC7388591
OpenAlexW3026867068

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.