Evidence map›Paper›PMID 32439707›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Molecular taxonomy of human ocular outflow tissues defined by single-cell transcriptomics.

Gaurang Patel, Wen Fury, Hua Yang, Maria Gomez-Caraballo, Yu Bai, Tao Yang, Christina Adler, Yi Wei, Min Ni, Heather Schmitt and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed, 1 pooled it
13.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 1 synthesis or guideline pooled it, 133 citations in OpenAlex.

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23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Gaurang PatelRegeneron Pharmaceuticals, Inc., Tarrytown, NY 10591.ORCID 0000-0003-2497-665X
Wen FuryRegeneron Pharmaceuticals, Inc., Tarrytown, NY 10591.
Hua YangRegeneron Pharmaceuticals, Inc., Tarrytown, NY 10591.
Maria Gomez-CaraballoDepartment of Ophthalmology, Duke University, Durham, NC 27710.
Yu BaiRegeneron Pharmaceuticals, Inc., Tarrytown, NY 10591.
Tao YangRegeneron Pharmaceuticals, Inc., Tarrytown, NY 10591.
Christina AdlerRegeneron Pharmaceuticals, Inc., Tarrytown, NY 10591.
Yi WeiRegeneron Pharmaceuticals, Inc., Tarrytown, NY 10591.
Min NiRegeneron Pharmaceuticals, Inc., Tarrytown, NY 10591.
Heather SchmittDepartment of Ophthalmology, Duke University, Durham, NC 27710.ORCID 0000-0003-2007-7542
Ying HuRegeneron Pharmaceuticals, Inc., Tarrytown, NY 10591.
George YancopoulosRegeneron Pharmaceuticals, Inc., Tarrytown, NY 10591.
W Daniel StamerDepartment of Ophthalmology, Duke University, Durham, NC 27710 dan.stamer@duke.edu carmelo.romano@regeneron.com.
Carmelo RomanoRegeneron Pharmaceuticals, Inc., Tarrytown, NY 10591; dan.stamer@duke.edu carmelo.romano@regeneron.com.ORCID 0000-0003-1138-4241
Regeneron (United States) · USDuke University · US

Funding

eNOS-Dependent Mechanoregulation of Intraocular PressureR01EY022359 · NEI · DUKE UNIVERSITY · PI STAMER, W DANIEL · 2012 to 2025
$5.6M
NEI NIH HHS R01 EY022359
6 · The paper itself

Abstract

The conventional outflow pathway is a complex tissue responsible for maintaining intraocular pressure (IOP) homeostasis. The coordinated effort of multiple cells with differing responsibilities ensures healthy outflow function and IOP maintenance. Dysfunction of one or more resident cell types results in ocular hypertension and risk for glaucoma, a leading cause of blindness. In this study, single-cell RNA sequencing was performed to generate a comprehensive cell atlas of human conventional outflow tissues. We obtained expression profiles of 17,757 genes from 8,758 cells from eight eyes of human donors representing the outflow cell transcriptome. Upon clustering analysis, 12 distinct cell types were identified, and region-specific expression of candidate genes was mapped in human tissues. Significantly, we identified two distinct expression patterns (myofibroblast- and fibroblast-like) from cells located in the trabecular meshwork (TM), the primary structural component of the conventional outflow pathway. We also located Schwann cell and macrophage signatures in the TM. The second primary component structure, Schlemm's canal, displayed a unique combination of lymphatic/blood vascular gene expression. Other expression clusters corresponded to cells from neighboring tissues, predominantly in the ciliary muscle/scleral spur, which together correspond to the uveoscleral outflow pathway. Importantly, the utility of our atlas was demonstrated by mapping glaucoma-relevant genes to outflow cell clusters. Our study provides a comprehensive molecular and cellular classification of conventional and unconventional outflow pathway structures responsible for IOP homeostasis.

Indexed as

Aqueous HumorGlaucomaHumansIntraocular PressureMacrophagesMyofibroblastsRNA-SeqSchwann CellsSingle-Cell AnalysisTrabecular Meshworkanterior chamberglaucomaoutflow facilitysingle-cell transcriptomicstrabecular meshwork

Identifiers

PMID32439707
PMCPMC7293718
OpenAlexW3028097629

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.