Evidence map›Paper›PMID 32438056›Full record

ReviewMatrix biology : journal of the International Society for Matrix Biology2020

Multi-scale models of lung fibrosis.

Julie Leonard-Duke, Stephanie Evans, Riley T Hannan, Thomas H Barker, Jason H T Bates, Catherine A Bonham, Bethany B Moore, Denise E Kirschner, Shayn M Peirce

Open access · greenAbstract readReview
In one paragraph

Review in Matrix biology : journal of the International Society for Matrix Biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.0field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 35 citations in OpenAlex.

  1. Modeling ventilation heterogeneity in lung fibrosis.Medical & biological engineering & computing · 2026
    Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. PersonalizedJournal of the Royal Society, Interface · 2024
    Article
  9. Article
  10. Review
  11. Article
  12. The evolution ofEuropean respiratory review : an official journal of the European Respiratory Society · 2024
    Review
  13. Review
  14. Computational lung modelling in respiratory medicine.Journal of the Royal Society, Interface · 2022
    Review
  15. Multiscale modeling in disease.Current opinion in systems biology · 2021
    Article
  16. Article
  17. International journal of molecular sciences · 2021
    Article
  18. Article
  19. Genetic Delivery and Gene Therapy in Pulmonary Hypertension.International journal of molecular sciences · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Julie Leonard-DukeDepartment of Biomedical Engineering, University of Virginia, Charlottesville, VA 22908, USA.
Stephanie EvansDepartment of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI 48109, USA.
Riley T HannanDepartment of Pathology, University of Virginia, Charlottesville, VA 22908, USA.
Thomas H BarkerDepartment of Biomedical Engineering, University of Virginia, Charlottesville, VA 22908, USA.
Jason H T BatesDepartment of Medicine, Vermont Lung Center, University of Vermont College of Medicine, Burlington, VT 05405, USA.
Catherine A BonhamDivision of Pulmonary and Critical Care Medicine, University of Virginia, Charlottesville VA 22908, USA.
Bethany B MooreDivision of Pulmonary and Critical Care Medicine, Department of Internal Medicine, and Department of Microbiology and Immunology, University of Michigan Medical Center, Ann Arbor, MI, 48109, USA.
Denise E KirschnerDepartment of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI 48109, USA.
Shayn M PeirceDepartment of Biomedical Engineering, University of Virginia, Charlottesville, VA 22908, USA; Robert M. Berne Cardiovascular Research Center, University of Virginia, Charlottesville, VA 22908, USA. Electronic address: shayn@virginia.edu.
University of Virginia · USUniversity of Michigan · USUniversity of Vermont · US

Funding

Immunobiology of Lung Injury and FibrosisR35HL144481 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MOORE, BETHANY B. · 2019 to 2024
$5.2M
Predicting protective T-cell responses in Tuberculosis using a systems biology approachR01AI123093 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI FLYNN, JOANNE L., KIRSCHNER, DENISE E · 2016 to 2020
$3.6M
Mechanosensors that detect and treat Lung FibrosisR01HL132585 · NHLBI · UNIVERSITY OF VIRGINIA · PI BARKER, THOMAS HARRISON · 2015 to 2019
$3.3M
A Multi-scale systems pharmacology approach to TB therapyU01HL131072 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DARTOIS, VERONIQUE, FLYNN, JOANNE L. · 2016 to 2019
$2.9M
Multiscale Modeling for Treatment Discovery in Duchenne Muscular DystrophyU01AR069393 · NIAMS · UNIVERSITY OF VIRGINIA · PI BLEMKER, SILVIA SALINAS, PEIRCE-COTTLER, SHAYN · 2016 to 2020
$2.5M
Personalized Mechanical Ventilation for the Injured LungR01HL124052 · NHLBI · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI BATES, JASON HT · 2014 to 2017
$2.4M
Targeting the alpha v integrin mechanotransduction axis in IPFR01HL127283 · NHLBI · UNIVERSITY OF VIRGINIA · PI BARKER, THOMAS HARRISON · 2015 to 2018
$1.6M
T cells in idiopathic pulmonary fibrosisK23HL143135 · NHLBI · UNIVERSITY OF VIRGINIA · PI BONHAM, CATHERINE ANN · 2018 to 2021
$662k
NHLBI NIH HHS K23 HL143135NHLBI NIH HHS L30 HL134087NHLBI NIH HHS R01 HL124052NHLBI NIH HHS R01 HL127283NHLBI NIH HHS R01 HL132585NHLBI NIH HHS R35 HL144481NHLBI NIH HHS U01 HL131072NIAID NIH HHS R01 AI123093NIAMS NIH HHS U01 AR069393
6 · The paper itself

Abstract

The architectural complexity of the lung is crucial to its ability to function as an organ of gas exchange; the branching tree structure of the airways transforms the tracheal cross-section of only a few square centimeters to a blood-gas barrier with a surface area of tens of square meters and a thickness on the order of a micron or less. Connective tissue comprised largely of collagen and elastic fibers provides structural integrity for this intricate and delicate system. Homeostatic maintenance of this connective tissue, via a balance between catabolic and anabolic enzyme-driven processes, is crucial to life. Accordingly, when homeostasis is disrupted by the excessive production of connective tissue, lung function deteriorates rapidly with grave consequences leading to chronic lung conditions such as pulmonary fibrosis. Understanding how pulmonary fibrosis develops and alters the link between lung structure and function is crucial for diagnosis, prognosis, and therapy. Further information gained could help elaborate how the healing process breaks down leading to chronic disease. Our understanding of fibrotic disease is greatly aided by the intersection of wet lab studies and mathematical and computational modeling. In the present review we will discuss how multi-scale modeling has facilitated our understanding of pulmonary fibrotic disease as well as identified opportunities that remain open and have produced techniques that can be incorporated into this field by borrowing approaches from multi-scale models of fibrosis beyond the lung.

Indexed as

Models, BiologicalChronic DiseaseComputer SimulationConnective TissueCytokinesElastic TissueExtracellular Matrix ProteinsFibroblastsGene Expression RegulationHomeostasisHumansIdiopathic Pulmonary FibrosisInflammationLungSignal TransductionTransforming Growth Factor beta1CytokinesExtracellular Matrix ProteinsTGFB1 protein, humanTransforming Growth Factor beta1FibroblastLung fibrosisMulti-scale computational models

Identifiers

PMID32438056
PMCPMC7434655
OpenAlexW3025115700

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.