Evidence map›Paper›PMID 32434930›Full record

ArticleThe Journal of biological chemistry2020

Ian J Campbell, Jose Luis Olmos, Weijun Xu, Dimithree Kahanda, Joshua T Atkinson, Othneil Noble Sparks, Mitchell D Miller, George N Phillips, George N Bennett, Jonathan J Silberg

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Ian J CampbellBiochemistry and Cell Biology Graduate Program, Rice University, Houston, Texas, USA.ORCID 0000-0003-3944-1260
Jose Luis OlmosBiochemistry and Cell Biology Graduate Program, Rice University, Houston, Texas, USA.ORCID 0000-0001-8400-0822
Weijun XuDepartment of Biosciences, Rice University, Houston, Texas, USA.
Dimithree KahandaDepartment of Biosciences, Rice University, Houston, Texas, USA.
Joshua T AtkinsonDepartment of Biosciences, Rice University, Houston, Texas, USA.ORCID 0000-0001-9293-4123
Othneil Noble SparksDepartment of Biosciences, Rice University, Houston, Texas, USA.ORCID 0000-0002-4843-5009
Mitchell D MillerDepartment of Biosciences, Rice University, Houston, Texas, USA.ORCID 0000-0003-1626-4943
George N PhillipsDepartment of Biosciences, Rice University, Houston, Texas, USA.ORCID 0000-0002-4171-4603
George N BennettDepartment of Biosciences, Rice University, Houston, Texas, USA.
Jonathan J SilbergDepartment of Biosciences, Rice University, Houston, Texas, USA joff@rice.edu.ORCID 0000-0001-5612-0667
Rice University · US

Funding

High-Speed High-Sensitivity Detector for X-ray Micro-Crystallography at GM/CA@APSS10OD012289 · OD · UNIVERSITY OF CHICAGO · PI FISCHETTI, ROBERT F. · 2014 to 2014
$2.0M
NIH HHS S10 OD012289Shared Services Center NASA 80NSSC18M0093
6 · The paper itself

Abstract

Marine cyanobacteria are infected by phages whose genomes encode ferredoxin (Fd) electron carriers. These Fds are thought to redirect the energy harvested from light to phage-encoded oxidoreductases that enhance viral fitness, but it is unclear how the biophysical properties and partner specificities of phage Fds relate to those of photosynthetic organisms. Here, results of a bioinformatics analysis using a sequence similarity network revealed that phage Fds are most closely related to cyanobacterial Fds that transfer electrons from photosystems to oxidoreductases involved in nutrient assimilation. Structural analysis of myovirus P-SSM2 Fd (pssm2-Fd), which infects the cyanobacterium

Indexed as

Bacterial ProteinsFerredoxinsOxidoreductases Acting on Sulfur Group DonorsProchlorococcusViral ProteinsBacteriophagesBacterial ProteinsFerredoxinsOxidoreductases Acting on Sulfur Group DonorsViral Proteinsbacteriophagecyanobacteriacyanophageelectron transferferredoxinhydrogen sulfidemarinereductasestructural biologysulfite reductase

Identifiers

PMID32434930
PMCPMC7397100
OpenAlexW3028135668

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.