Evidence map›Paper›PMID 32434916›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Viral infection impacts transposable element transcript amounts in

Marlène Roy, Barbara Viginier, Édouard Saint-Michel, Frédérick Arnaud, Maxime Ratinier, Marie Fablet

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 43 citations in OpenAlex.

  1. Pooled it
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  12. Experimentally evolvingGenome research · 2024
    Article
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  14. Human DNA Mutations and their Impact on Genetic Disorders.Recent patents on biotechnology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Marlène RoyLaboratoire de Biométrie et Biologie Evolutive, Université Lyon 1, CNRS, UMR 5558, Université de Lyon, Villeurbanne 69622, France.ORCID 0000-0003-2346-6332
Barbara ViginierÉcole Pratique des Hautes Études (EPHE), Institut National de la Recherche Agronomique (INRA), Université de Lyon, Université Claude Bernard Lyon1, UMR 754, Infections Virales et Pathologie Comparée (IVPC), Paris Sciences Lettres (PSL) Research University, F-69007, Lyon, France.
Édouard Saint-MichelLabex Agence Nationale de la Recherche ECOFECT, Université de Lyon, Lyon 69361, France.
Frédérick ArnaudÉcole Pratique des Hautes Études (EPHE), Institut National de la Recherche Agronomique (INRA), Université de Lyon, Université Claude Bernard Lyon1, UMR 754, Infections Virales et Pathologie Comparée (IVPC), Paris Sciences Lettres (PSL) Research University, F-69007, Lyon, France.ORCID 0000-0001-6893-9848
Maxime RatinierÉcole Pratique des Hautes Études (EPHE), Institut National de la Recherche Agronomique (INRA), Université de Lyon, Université Claude Bernard Lyon1, UMR 754, Infections Virales et Pathologie Comparée (IVPC), Paris Sciences Lettres (PSL) Research University, F-69007, Lyon, France; maxime.ratinier@univ-lyon1.fr marie.fablet@univ-lyon1.fr.ORCID 0000-0003-2271-3549
Marie FabletLaboratoire de Biométrie et Biologie Evolutive, Université Lyon 1, CNRS, UMR 5558, Université de Lyon, Villeurbanne 69622, France; maxime.ratinier@univ-lyon1.fr marie.fablet@univ-lyon1.fr.ORCID 0000-0002-7819-4541
Université Claude Bernard Lyon 1 · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transposable elements (TEs) are genomic parasites that are found in all genomes, some of which display sequence similarity to certain viruses. In insects, TEs are controlled by the Piwi-interacting small interfering RNA (piRNA) pathway in gonads, while the small interfering RNA (siRNA) pathway is dedicated to TE somatic control and defense against viruses. So far, these two small interfering RNA pathways are considered to involve distinct molecular effectors and are described as independent. Using Sindbis virus (SINV) in

Indexed as

DNA Transposable ElementsAlphavirus InfectionsAnimalsDrosophila melanogasterDrosophila ProteinsEvolution, MolecularFemaleRNA, Small InterferingSindbis VirusDNA Transposable ElementsDrosophila ProteinsRNA, Small InterferinginsectpiRNASINVsiRNAtransposon

Identifiers

PMID32434916
PMCPMC7275722
OpenAlexW3027273980

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.