Evidence map›Paper›PMID 32432379›Full record

ArticleThe EMBO journal2020

A novel approach to measure mitochondrial respiration in frozen biological samples.

Rebeca Acin-Perez, Ilan Y Benador, Anton Petcherski, Michaela Veliova, Gloria A Benavides, Sylviane Lagarrigue, Arianne Caudal, Laurent Vergnes, Anne N Murphy, Georgios Karamanlidis and 10 more

Abstract read
In one paragraph

Article in The EMBO journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 151 papers.

0numbers the graph read from it
0cells of the map it votes in
151citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

151 citing papers in PubMed.

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  11. CTRP10 is required for optimal motor function.The Journal of biological chemistry · 2026
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91 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Rebeca Acin-Perez *Department of Medicine, Endocrinology, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.ORCID 0000-0001-9553-8337
Ilan Y BenadorDepartment of Medicine, Endocrinology, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.
Anton PetcherskiDepartment of Medicine, Endocrinology, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.
Michaela VeliovaDepartment of Medicine, Endocrinology, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.
Gloria A BenavidesDepartment of Pathology and Mitochondrial Medicine Laboratory, University of Alabama at Birmingham, Birmingham, AL, USA.
Sylviane LagarrigueDepartment of Biomedical Sciences, University of Lausanne, Lausanne, Switzerland.
Arianne CaudalMitochondria and Metabolism Center, University of Washington, Seattle, WA, USA.
Laurent VergnesMetabolism Theme, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.
Anne N MurphyDepartment of Pharmacology, University of California, San Diego, CA, USA.ORCID 0000-0002-5222-9902
Georgios KaramanlidisCardiometabolic Disorders, Amgen Research, Thousand Oaks, CA, USA.
Rong TianMitochondria and Metabolism Center, University of Washington, Seattle, WA, USA.
Karen ReueMetabolism Theme, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.
Jonathan WanagatMetabolism Theme, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.
Harold SacksDepartment of Medicine, Endocrinology, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.
Francesca AmatiDepartment of Biomedical Sciences, University of Lausanne, Lausanne, Switzerland.
Victor M Darley-UsmarDepartment of Pathology and Mitochondrial Medicine Laboratory, University of Alabama at Birmingham, Birmingham, AL, USA.
Marc LiesaDepartment of Medicine, Endocrinology, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.ORCID 0000-0002-5909-8570
Ajit S DivakaruniMetabolism Theme, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.ORCID 0000-0002-2528-9651
Linsey Stiles *Department of Medicine, Endocrinology, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.ORCID 0000-0002-1514-458X
Orian S Shirihai *Department of Medicine, Endocrinology, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.ORCID 0000-0001-8466-3431

Funding

UAB-UCSD O'Brien Core Center for Acute Kidney Injury ResearchP30DK079337 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI AGARWAL, ANUPAM · 2008 to 2022
$18.3M
UCLA OLDER AMERICANS INDEPENDENCE CENTERP30AG028748 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI REUBEN, DAVID B. · 2006 to 2017
$9.8M
Sex Differences in the Metabolic SyndromeU54DK120342 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI REUE, KAREN · 2018 to 2022
$7.6M
NAD+/NADH ratio, protein acetylation and mitochondrial functionR01HL110349 · NHLBI · UNIVERSITY OF WASHINGTON · PI TIAN, RONG · 2011 to 2020
$5.7M
Fatty acid oxidation suppresses cardiac hypertrophyR01HL129510 · NHLBI · UNIVERSITY OF WASHINGTON · PI TIAN, RONG · 2015 to 2018
$2.8M
OPTIMIZATION OF NANOPARTICLE TUMOR-LOCALIZATION AND DRUG-LOADINGFOR TREATING MESOTHELIOMAR01CA232056 · NCI · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI COLSON, YOLONDA L, GRINSTAFF, MARK W. · 2019 to 2023
$2.7M
Mitochondrial function and glycolytic switch in pathological cardiac hypertrophyR01HL142628 · NHLBI · UNIVERSITY OF WASHINGTON · PI TIAN, RONG · 2018 to 2021
$2.4M
Mitochondrial biogenesis, genetics and cell loss in mammalian agingR01AG055518 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI AIKEN, JUDD M., HERBST, ALLEN · 2017 to 2022
$2.0M
Mitochondrial regulation of energy efficiencyR01DK099618 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CORKEY, BARBARA E., SHIRIHAI, ORIAN S · 2014 to 2018
$1.8M
Role of the heme-related mitochondrial antioxidant ABCB10 in alcoholic liver diseaseR01AA026914 · NIAAA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SHIRIHAI, ORIAN S · 2019 to 2022
$1.4M
Mitochondrial biogenesis, genetics and cell loss in mammalian agingK02AG059847 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI WANAGAT, JONATHAN · 2018 to 2022
$801k
Mitochondrial DNA Deletion Mutations: Biomarkers of AgingR56AG060880 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI AIKEN, JUDD M., ALLISON, DAVID B · 2018 to 2018
$574k
American Diabetes Association (ADA) 1-19-IBS-049HHS | National Institutes of Health (NIH) HL110349HHS | National Institutes of Health (NIH) R01AA026914-01A1HHS | National Institutes of Health (NIH) R01AG055518HHS | National Institutes of Health (NIH) R01 CA232056-01HHS | National Institutes of Health (NIH) R01 DK099618-05HHS | National Institutes of Health (NIH) R56AG060880NCI NIH HHS R01 CA232056NHLBI NIH HHS R01 HL110349NHLBI NIH HHS R01 HL129510NHLBI NIH HHS R01 HL142628NIAAA NIH HHS R01 AA026914NIAMS NIH HHS R21 AR072950NIA NIH HHS K02 AG059847NIA NIH HHS P30 AG028748NIA NIH HHS R01 AG055518NIA NIH HHS R21 AG060456NIA NIH HHS R21 AG063373NIA NIH HHS R56 AG060880NIDDK NIH HHS P30 DK079337NIDDK NIH HHS R01 DK099618NIDDK NIH HHS U54 DK120342Swiss National Science Foundation 320030_170062University Alabama Birmingham P30 G050886
6 · The paper itself

Abstract

Respirometry is the gold standard measurement of mitochondrial oxidative function, as it reflects the activity of the electron transport chain complexes working together. However, the requirement for freshly isolated mitochondria hinders the feasibility of respirometry in multi-site clinical studies and retrospective studies. Here, we describe a novel respirometry approach suited for frozen samples by restoring electron transfer components lost during freeze/thaw and correcting for variable permeabilization of mitochondrial membranes. This approach preserves 90-95% of the maximal respiratory capacity in frozen samples and can be applied to isolated mitochondria, permeabilized cells, and tissue homogenates with high sensitivity. We find that primary changes in mitochondrial function, detected in fresh tissue, are preserved in frozen samples years after collection. This approach will enable analysis of the integrated function of mitochondrial Complexes I to IV in one measurement, collected at remote sites or retrospectively in samples residing in tissue biobanks.

Indexed as

CryopreservationOxygen ConsumptionAnimalsElectron Transport Chain Complex ProteinsMaleMiceMitochondriaZebrafishZebrafish ProteinsElectron Transport Chain Complex ProteinsZebrafish Proteinsfrozen tissuemethodologymitochondrial contentmitochondrial uncoupled respirationoxygen consumption

Identifiers

PMID32432379
PMCPMC7327496

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.