Evidence map›Paper›PMID 32431721›Full record

ArticleFrontiers in plant science2020

A Fast and Automatic Method for Leaf Vein Network Extraction and Vein Density Measurement Based on Object-Oriented Classification.

Jiyou Zhu, Jiangming Yao, Qiang Yu, Weijun He, Chengyang Xu, Guoming Qin, Qiuyu Zhu, Dayong Fan, Hua Zhu

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Jiyou ZhuKey Laboratory for Silviculture and Conservation of Ministry of Education, Key Laboratory for Silviculture and Forest Ecosystem of State Forestry Administration, Research Center for Urban Forestry, Beijing Forestry University, Beijing, China.
Jiangming YaoForestry College, Guangxi University, Nanning, China.
Qiang YuKey Laboratory for Silviculture and Conservation of Ministry of Education, Key Laboratory for Silviculture and Forest Ecosystem of State Forestry Administration, Research Center for Urban Forestry, Beijing Forestry University, Beijing, China.
Weijun HeForestry College, Guangxi University, Nanning, China.
Chengyang XuKey Laboratory for Silviculture and Conservation of Ministry of Education, Key Laboratory for Silviculture and Forest Ecosystem of State Forestry Administration, Research Center for Urban Forestry, Beijing Forestry University, Beijing, China.
Guoming QinResearch Institute of Tropical Forestry, Chinese Academy of Forestry, Guangzhou, China.
Qiuyu ZhuInspection Department of Guangxi Medical College, Nanning, China.
Dayong FanKey Laboratory for Silviculture and Conservation of Ministry of Education, Key Laboratory for Silviculture and Forest Ecosystem of State Forestry Administration, Research Center for Urban Forestry, Beijing Forestry University, Beijing, China.
Hua ZhuInspection Department of Guangxi Medical College, Nanning, China.
Beijing Forestry University · CNGuangxi Special Equipment Inspection Institute · CNChinese Academy of Forestry · CNGuangxi University · CNResearch Institute of Tropical Forestry · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rapidly determining leaf vein network patterns and vein densities is biologically important and technically challenging. Current methods, however, are limited to vein contour extraction. Further image processing is difficult, and some leaf vein traits of interest therefore cannot be quantified. In this study, we proposed a novel method for the fast and accurate determination of leaf vein network patterns and vein density. Nine tree species with different leaf characteristics and vein types were applied to verify this method. To overcome the image processing difficulties at the microscopic scale, we adopted the remote object-oriented classification method applied comprehensively in the field of remote sensing research. The key to this approach is to determine the universally applicable leaf vein extraction threshold values (scale parameter, shape parameter, compactness parameter, brightness feature, spectral feature and geometric feature). Based on our analysis, the following recommended threshold values were determined: the scale parameter was 250, the shape parameter was 0.7, the compactness parameter was 0.3, the brightness feature value was 230∼280, the spectral feature value was 180∼230, and the geometric feature value was less than 2. With the optimal extraction parameters applied, the extraction precision was above 96.40% on average for the nine species studied. The leaf vein density calculation rate increased by more than 87.3% compared to that of the traditional methods. The results showed that this method is accurate, fast, flexible and complementary to existing technologies. It is an effective tool for the fast extraction of vein networks and the exploration of leaf vein characteristics, particularly for large-scale studies in plant vein physiology.

Indexed as

extractionleaf vein densityleaf vein networkobject-oriented methodremote sensing

Identifiers

PMID32431721
PMCPMC7214732
OpenAlexW3021397873

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.