Evidence map›Paper›PMID 32430397›Full record

ArticleThe Journal of biological chemistry2020

An improved and highly selective fluorescence assay for measuring phosphatidylserine decarboxylase activity.

Jae-Yeon Choi, Raymond Black, HeeJung Lee, James Di Giovanni, Robert C Murphy, Choukri Ben Mamoun, Dennis R Voelker

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Molecular remodelling ofJournal of medical microbiology · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Jae-Yeon ChoiBasic Science Section, Department of Medicine, National Jewish Health, Denver, Colorado, USA.
Raymond BlackBasic Science Section, Department of Medicine, National Jewish Health, Denver, Colorado, USA.
HeeJung LeeBasic Science Section, Department of Medicine, National Jewish Health, Denver, Colorado, USA.
James Di GiovanniDepartment of Pharmacology, University of Colorado Denver, Aurora, Colorado, USA.
Robert C MurphyDepartment of Pharmacology, University of Colorado Denver, Aurora, Colorado, USA.
Choukri Ben MamounSection of Infectious Diseases, Department of Internal Medicine, Yale School of Medicine, New Haven, Connecticut, USA.
Dennis R VoelkerBasic Science Section, Department of Medicine, National Jewish Health, Denver, Colorado, USA. Electronic address: voelkerd@njhealth.org.
National Jewish Health · USUniversity of Colorado Denver · USYale University · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Hit-to-Lead Development of the Kalihinol Scaffold for Malaria TreatmentR01AI138139 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI BEN MAMOUN, CHOUKRI, LE ROCH, KARINE GAELLE · 2018 to 2022
$3.6M
Development of endochin-like quinolones for babesiosis therapyR01AI123321 · NIAID · YALE UNIVERSITY · PI BEN MAMOUN, CHOUKRI · 2017 to 2020
$2.7M
Function and Inhibition of Plasmodium Lipid DecarboxylasesR01AI097218 · NIAID · YALE UNIVERSITY · PI BEN MAMOUN, CHOUKRI · 2012 to 2016
$2.0M
Structure and Function of Eukaryotic Phosphatidylserine DecarboxylaseR01GM104485 · NIGMS · NATIONAL JEWISH HEALTH · PI VOELKER, DENNIS R. · 2013 to 2016
$1.2M
NCATS NIH HHS UL1 TR001863NIAID NIH HHS R01 AI097218NIAID NIH HHS R01 AI123321NIAID NIH HHS R01 AI138139NIGMS NIH HHS R01 GM104485
6 · The paper itself

Abstract

Phosphatidylserine decarboxylases (PSDs) catalyze the conversion of phosphatidylserine (PS) to phosphatidylethanolamine (PE), a critical step in membrane biogenesis and a potential target for development of antimicrobial and anti-cancer drugs. PSD activity has typically been quantified using radioactive substrates and products. Recently, we described a fluorescence-based assay that measures the PSD reaction using distyrylbenzene-bis-aldehyde (DSB-3), whose reaction with PE produces a fluorescence signal. However, DSB-3 is not widely available and also reacts with PSD's substrate, PS, producing an adduct with lower fluorescence yield than that of PE. Here, we report a new fluorescence-based assay that is specific for PSD and in which the presence of PS causes only negligible background. This new assay uses 1,2-diacetyl benzene/β-mercaptoethanol, which forms a fluorescent iso-indole-mercaptide conjugate with PE. PE detection with this method is very sensitive and comparable with detection by radiochemical methods. Model reactions examining adduct formation with ethanolamine produced stable products of exact masses (

Indexed as

AcetophenonesCandida albicansCarboxy-LyasesCell MembraneEthanolamineFluorescenceFluorescent DyesHeLa CellsHigh-Throughput Screening AssaysHumansMercaptoethanolMitochondriaPhosphatidylethanolaminesPhosphatidylserinesSpectrometry, FluorescenceStyrenes1,2-diacetylbenzeneAcetophenonesCarboxy-LyasesdistyrylbenzeneEthanolamineFluorescent DyesMercaptoethanolphosphatidylethanolaminePhosphatidylethanolaminesphosphatidylserine decarboxylasePhosphatidylserinesStyrenes12-diacetyl benzeneassay developmentfluorescencehigh-throughput screening (HTS)inhibitormembrane biogenesismembrane phospholipidphosphatidylethanolaminephosphatidylserinephosphatidylserine decarboxylase

Identifiers

PMID32430397
PMCPMC7335775
OpenAlexW3027983581

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.