Evidence map›Paper›PMID 32429898›Full record

ArticleBMC microbiology2020

Viral metagenomic analysis of fecal samples reveals an enteric virome signature in irritable bowel syndrome.

Mina Hojat Ansari, Mehregan Ebrahimi, Mohammad Reza Fattahi, Michael G Gardner, Ali Reza Safarpour, Mohammad Ali Faghihi, Kamran Bagheri Lankarani

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
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  6. Antiviral Activity of Natural Compounds for Food Safety.Food and environmental virology · 2024
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  9. The Human Microbiome-A Physiologic Perspective.Comprehensive Physiology · 2024
    Review
  10. Review
  11. Review
  12. Article
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  14. Review
  15. The gut virome and the relevance of temperate phages in human health.Frontiers in cellular and infection microbiology · 2023
    Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Mina Hojat AnsariGastroenterohepatology Research Center, Shiraz University of Medical Sciences, Shiraz, Iran.
Mehregan EbrahimiDepartment of Biology, Shiraz University, Shiraz, Fars Province, Iran.
Mohammad Reza FattahiGastroenterohepatology Research Center, Shiraz University of Medical Sciences, Shiraz, Iran.
Michael G GardnerCollege of Science and Engineering, Flinders University, Adelaide, South Australia, Australia.
Ali Reza SafarpourGastroenterohepatology Research Center, Shiraz University of Medical Sciences, Shiraz, Iran.
Mohammad Ali FaghihiPersian Bayan Gene Research and Training Center, Dr. Faghihi's Medical Genetics Center, Shiraz, Iran.
Kamran Bagheri LankaraniHealth Policy Research Center, Institute of Health, Shiraz University of Medical Sciences, Shiraz, Iran. lankarani.kb@gmail.com.ORCID 0000-0002-7524-9017
Shiraz University of Medical Sciences · IRFlinders University · AUShiraz University · IRUniversity of Miami · US

Funding

Iran's National Elites Foundation S/94/60/181
6 · The paper itself

Abstract

backgroundChanges in the enteric microbiota have been suggested to contribute to gastrointestinal diseases, including irritable bowel syndrome. Most of the published work is on bacterial dysbiosis with meager data on the role of the virome in irritable bowel syndrome and other gastrointestinal diseases. In the current study, we therefore aimed to investigate the viral community composition of the gut and test for potential dysbiosis linked to irritable bowel syndrome.

resultsA metagenomics analysis on fecal samples of 50 individuals - 30 of whom met the Rome IV criteria for IBS and 20 healthy controls- was conducted. There was a noticeable alteration in viral taxa observed in association with irritable bowel syndrome when compared to healthy individuals - where some eukaryotic viral taxa noticeably prevail over others. We observed a significant decrease in the diversity and abundance of enteric virome particularly in eukaryotic viruses of Megavirales in patients with irritable bowel syndrome.

conclusionsThese findings shed light on a new hypothesis that the alteration of the viral taxa contributes to the pathogenesis of irritable bowel syndrome and related symptoms, and therefore, pave the way for developing a new diagnostic biomarker or anti-viral drugs for the treatment of irritable bowel syndrome.

Indexed as

AdultCase-Control StudiesFecesFemaleHumansIrritable Bowel SyndromeMaleMetagenomicsPhylogenyVirusesWhole Genome SequencingBacteriophagesEnteric viromeEukaryotic virusesIrritable bowel syndromeMetagenomics analysisMicrobiota

Identifiers

PMID32429898
PMCPMC7236503
OpenAlexW3026958565

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.