Evidence map›Paper›PMID 32424464›Full record

ArticlePhotosynthesis research2020

Characterization of Sll1558 in environmental stress tolerance of Synechocystis sp. PCC 6803.

Junji Uchiyama, Yutaro Ito, Ayumi Matsuhashi, Yuta Ichikawa, Mamoru Sambe, Shuichi Kitayama, Yuka Yoshino, Atushi Moriyama, Hidetaka Kohga, Satoru Ogawa and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Photosynthesis research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 61% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Adaptive Laboratory Evolution inMicroorganisms · 2026
    Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Junji UchiyamaDepartment of Biology, Faculty of Science, Tokyo University of Science, Shinjuku-ku, Tokyo, 162-8601, Japan. junjiutiyama@yahoo.co.jp.
Yutaro ItoDepartment of Biological Science and Technology, Tokyo University of Science, Katsushika-ku, Tokyo, 125-8585, Japan.
Ayumi MatsuhashiGraduate School of Mathematics and Science Education, Tokyo University of Science, Shinjuku-ku, Tokyo, 162-8601, Japan.
Yuta IchikawaGraduate School of Mathematics and Science Education, Tokyo University of Science, Shinjuku-ku, Tokyo, 162-8601, Japan.
Mamoru SambeGraduate School of Mathematics and Science Education, Tokyo University of Science, Shinjuku-ku, Tokyo, 162-8601, Japan.
Shuichi KitayamaGraduate School of Mathematics and Science Education, Tokyo University of Science, Shinjuku-ku, Tokyo, 162-8601, Japan.
Yuka YoshinoGraduate School of Mathematics and Science Education, Tokyo University of Science, Shinjuku-ku, Tokyo, 162-8601, Japan.
Atushi MoriyamaGraduate School of Mathematics and Science Education, Tokyo University of Science, Shinjuku-ku, Tokyo, 162-8601, Japan.
Hidetaka KohgaGraduate School of Mathematics and Science Education, Tokyo University of Science, Shinjuku-ku, Tokyo, 162-8601, Japan.
Satoru OgawaLaboratory of Electron Microscopy, School of Medicine, Mie University, Tsu, Mie, 514-8507, Japan.
Hisataka OhtaDepartment of Biology, Faculty of Science, Tokyo University of Science, Shinjuku-ku, Tokyo, 162-8601, Japan.
Tokyo University of Science · JPMie University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

So far, the molecular mechanisms underlying the acidic-stress responses of plants are complicated and only fragmentally understood. Here, we investigated the mechanisms responsible for acidic-stress acclimation. Previously, DNA microarray analysis identified the sll1558 gene in Synechocystis sp. PCC 6803 (hereafter called Synechocystis 6803) to be upregulated following short-term acid treatment (1 h at pH 3.0). The sll1558 gene encodes uridine diphosphate-glucose pyrophosphorylase (UDP-glucose pyrophosphorylase), which catalyzes the conversion of glucose-1-phosphate into UDP-glucose. We constructed mutant cells for this gene and analyzed their phenotype. The sll1558 gene did not completely segregate in sll1558 mutant cells; thus, Sll1558 is essential for the survival of Synechocystis 6803. Besides, the partially disrupted sll1558 mutant cells were highly sensitive to acidic stress (pH 6.0) as well as other stress conditions (high salt, high osmolality, high/low temperature, and ultraviolet-B stress); the number of sll1558 transcripts increased under these conditions. UDP-glucose is used for the synthesis of various materials, such as glycolipids. From the membrane lipid composition analysis, digalactosyldiacylglycerol decreased and phosphatidylglycerol increased in the partially disrupted sll1558 mutant cells under acidic stress. These results suggest that sll1558 is important not only for the survival of Synechocystis 6803, but also for tolerance under various stress conditions.

Indexed as

MutationPhenotypeSodium ChlorideStress, PhysiologicalSynechocystisUp-RegulationSodium ChlorideAcidic stressCyanobacteriaEnvironmental stressUridine diphosphate-glucose pyrophosphorylase

Identifiers

PMID32424464
OpenAlexW3027534114

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.