Evidence map›Paper›PMID 32424446›Full record

ArticleArchives of virology2020

Full genome sequence of a new mitovirus from the phytopathogenic fungus Rhizoctonia solani.

Siwei Li, Yuting Li, Chenghui Hu, Chenggui Han, Tao Zhou, Can Zhao, Xuehong Wu

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Anastomosis Groups and Mycovirome ofJournal of fungi (Basel, Switzerland) · 2023
    Article
  11. Diversity of Mycoviruses Present in Strains of BinucleateJournal of fungi (Basel, Switzerland) · 2023
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Siwei LiCollege of Plant Protection, China Agricultural University, Haidian District, Beijing, 100193, People's Republic of China.
Yuting LiCollege of Plant Protection, China Agricultural University, Haidian District, Beijing, 100193, People's Republic of China.
Chenghui HuCollege of Plant Protection, China Agricultural University, Haidian District, Beijing, 100193, People's Republic of China.
Chenggui HanCollege of Plant Protection, China Agricultural University, Haidian District, Beijing, 100193, People's Republic of China.
Tao ZhouCollege of Plant Protection, China Agricultural University, Haidian District, Beijing, 100193, People's Republic of China.
Can ZhaoCollege of Plant Protection, China Agricultural University, Haidian District, Beijing, 100193, People's Republic of China. cancanzhao1990@qq.com.
Xuehong WuCollege of Plant Protection, China Agricultural University, Haidian District, Beijing, 100193, People's Republic of China. wuxuehong@cau.edu.cn.ORCID http://orcid.org/0000-0003-2669-2300
China Agricultural University · CNInstitute of Plant Protection · CN

Funding

National Training Program of Innovation and Entrepreneurship for Undergraduates 201910019031the earmarked fund for China Agriculture Research System CARS-170304
6 · The paper itself

Abstract

A double-stranded RNA (dsRNA) segment was identified in Rhizoctonia solani anastomosis group (AG)-2-2IIIB, the primary causal agent of Rhizoctonia crown and root rot of sugar beet. The dsRNA segment represented the genome replication intermediate of a new mitovirus that was tentatively designated as "Rhizoctonia solani mitovirus 39" (RsMV-39). The complete sequence of the dsRNA was 2805 bp in length with 61.9% A+U content. Using either the fungal mitochondrial or universal genetic code, a protein of 840 amino acids containing an RNA-dependent RNA polymerase (RdRp) domain was predicted with a molecular mass of 94.46 kDa. BLASTp analysis revealed that the RdRp domain of RsMV-39 had 43.55% to 72.96% sequence identity to viruses in the genus Mitovirus, and was the most similar (72.96% identical) to that of Ceratobasidium mitovirus A (CbMV-A). Phylogenetic analysis based on RdRp domains clearly showed that RsMV-39 is a member of a distinct species in the genus Mitovirus of the family Mitoviridae. This is the first full genome sequence of a mycovirus associated with R. solani AG-2-2IIIB.

Indexed as

Genome, ViralBase SequenceBeta vulgarisFungal VirusesPhylogenyPlant DiseasesRhizoctoniaRNA Viruses

Identifiers

PMID32424446
OpenAlexW3028142332

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.