Evidence map›Paper›PMID 32424275›Full record

ArticleNature cell biology2020

Enhancer reprogramming driven by high-order assemblies of transcription factors promotes phenotypic plasticity and breast cancer endocrine resistance.

Mingjun Bi, Zhao Zhang, Yi-Zhou Jiang, Pengya Xue, Hu Wang, Zhao Lai, Xiaoyong Fu, Carmine De Angelis, Yue Gong, Zhen Gao and 11 more

Open access · greenAbstract read
In one paragraph

Article in Nature cell biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 100 papers.

0numbers the graph read from it
0cells of the map it votes in
100citing papers in PubMed
6.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

100 citing papers in PubMed, 132 citations in OpenAlex.

  1. Review
  2. FFPE-CUTAC: A Single Assay, Multiple Layers.bioRxiv : the preprint server for biology · 2026
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  9. Game of clones: decipher lineage plasticity in hormone-driven cancers.Cellular and molecular life sciences : CMLS · 2026
    Review
  10. The GATA3-RFPL3-ASK1 axis suppresses breast cancer growth and lung metastasis.Apoptosis : an international journal on programmed cell death · 2026
    Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Review
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  20. Article

40 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

21 authors at 7 institutions in 3 countries.

Mingjun Bi *Department of Molecular Medicine, Mays Cancer Center, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.ORCID http://orcid.org/0000-0001-8748-2636
Zhao Zhang *Department of Molecular Medicine, Mays Cancer Center, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.ORCID http://orcid.org/0000-0002-3679-8945
Yi-Zhou JiangDepartment of Breast Surgery, Fudan University Shanghai Cancer Center, Shanghai, China.
Pengya XueDepartment of Molecular Medicine, Mays Cancer Center, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.ORCID http://orcid.org/0000-0002-5887-1760
Hu WangDepartment of Molecular Medicine, Mays Cancer Center, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.
Zhao LaiDepartment of Molecular Medicine, Mays Cancer Center, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.
Xiaoyong FuDepartment of Medicine, Department of Molecular and Cellular Biology, Lester & Sue Smith Breast Center, Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0000-0003-0005-6496
Carmine De AngelisDepartment of Medicine, Department of Molecular and Cellular Biology, Lester & Sue Smith Breast Center, Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0000-0003-1158-4630
Yue GongDepartment of Breast Surgery, Fudan University Shanghai Cancer Center, Shanghai, China.
Zhen GaoDepartment of Computer Science, University of Texas at San Antonio, San Antonio, TX, USA.
Jianhua RuanDepartment of Molecular Medicine, Mays Cancer Center, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.
Victor X JinDepartment of Molecular Medicine, Mays Cancer Center, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.
Elisabetta MarangoniTranslational Research Department, Institut Curie, PSL University, Paris, France.
Elodie MontaudonTranslational Research Department, Institut Curie, PSL University, Paris, France.
Christopher K GlassDepartment of Cellular and Molecular Medicine, Institute of Genomic Medicine, University of California at San Diego, La Jolla, CA, USA.
Wei LiDepartment of Biological Chemistry, University of California, Irvine, Irvine, CA, USA.ORCID http://orcid.org/0000-0001-9931-5990
Tim Hui-Ming HuangDepartment of Molecular Medicine, Mays Cancer Center, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.
Zhi-Ming ShaoDepartment of Breast Surgery, Fudan University Shanghai Cancer Center, Shanghai, China.
Rachel SchiffDepartment of Medicine, Department of Molecular and Cellular Biology, Lester & Sue Smith Breast Center, Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0000-0003-1696-5213
Lizhen ChenDepartment of Molecular Medicine, Mays Cancer Center, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA. ChenL7@uthscsa.edu.ORCID http://orcid.org/0000-0001-5313-7340
Zhijie LiuDepartment of Molecular Medicine, Mays Cancer Center, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA. LiuZ7@uthscsa.edu.ORCID http://orcid.org/0000-0001-6956-7839
The University of Texas Health Science Center at San Antonio · USBaylor College of Medicine · USFudan University Shanghai Cancer Center · CNUniversité Paris Sciences et Lettres · FRThe University of Texas at San Antonio · USUniversity of California, Irvine · USUniversity of California San Diego · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI Michael M Ittmann · 2007 to 2026
$73.9M
TISSUE CULTURE---COREP30CA054174 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Robin Jean Leach · 1991 to 2026
$59.1M
TUMOR SUPPRESSOR GENES IN BREAST CANCER DEVELOPMENTP50CA058183 · NCI · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI GUTIERREZ, CAROLLINA · 1992 to 2012
$30.9M
Systems Analysis of Epigenomic Architecture in Cancer ProgressionU54CA217297 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI HUANG, TIM H.-M. · 2017 to 2021
$9.3M
Omics analysis of three-dimensional transcriptional regulationR01GM114142 · NIGMS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI JIN, VICTOR, LIN, SHILI · 2015 to 2024
$2.7M
Novel Coregulators of Estrogen Receptor in Enhancer-regulated TranscriptionR01GM137009 · NIGMS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI LIU, ZHIJIE "JASON" · 2020 to 2023
$1.0M
High Throughput DNA Sequencer: Illumina HiSeq 3000 SequencerS10OD021805 · OD · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI LAI, ZHAO · 2016 to 2016
$600k
NCI NIH HHS P30 CA054174NCI NIH HHS P30 CA125123NCI NIH HHS P50 CA058183NCI NIH HHS U54 CA217297NIGMS NIH HHS R01 GM114142NIGMS NIH HHS R01 GM137009NIH HHS S10 OD021805
6 · The paper itself

Abstract

Acquired therapy resistance is a major problem for anticancer treatment, yet the underlying molecular mechanisms remain unclear. Using an established breast cancer cellular model, we show that endocrine resistance is associated with enhanced phenotypic plasticity, indicated by a general downregulation of luminal/epithelial differentiation markers and upregulation of basal/mesenchymal invasive markers. Consistently, similar gene expression changes are found in clinical breast tumours and patient-derived xenograft samples that are resistant to endocrine therapies. Mechanistically, the differential interactions between oestrogen receptor α and other oncogenic transcription factors, exemplified by GATA3 and AP1, drive global enhancer gain/loss reprogramming, profoundly altering breast cancer transcriptional programs. Our functional studies in multiple culture and xenograft models reveal a coordinated role of GATA3 and AP1 in re-organizing enhancer landscapes and regulating cancer phenotypes. Collectively, our study suggests that differential high-order assemblies of transcription factors on enhancers trigger genome-wide enhancer reprogramming, resulting in transcriptional transitions that promote tumour phenotypic plasticity and therapy resistance.

Indexed as

Adaptation, PhysiologicalCellular ReprogrammingDrug Resistance, NeoplasmGene Expression Regulation, NeoplasticAnimalsAntineoplastic Agents, HormonalApoptosisBreast NeoplasmsCell ProliferationEstrogen Receptor alphaFemaleGATA3 Transcription FactorHumansMiceMice, NudeTamoxifenAntineoplastic Agents, HormonalESR1 protein, humanEstrogen Receptor alphaGATA3 protein, humanGATA3 Transcription FactorTamoxifenTranscription Factor AP-1

Identifiers

PMID32424275
PMCPMC7737911
OpenAlexW3025520651

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.