Evidence map›Paper›PMID 32424207›Full record

ArticleScientific reports2020

Metagenomic analysis of an urban resistome before and after wastewater treatment.

Felipe Lira, Ivone Vaz-Moreira, Javier Tamames, Célia M Manaia, José Luis Martínez

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 96 citations in OpenAlex.

  1. Structure of Bacterial Community with Resistance to Antibiotics in Aquatic Environments. A Systematic Review.International journal of environmental research and public health · 2021
    Pooled it
  2. Review
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  9. Applied and environmental microbiology · 2024
    Article
  10. Presence and Persistence ofMicroorganisms · 2024
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  12. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Felipe LiraCentro Nacional de Biotecnología. Consejo Superior de Investigaciones Científicas (CSIC), Cantoblanco, Madrid, USA.ORCID http://orcid.org/0000-0002-5953-554X
Ivone Vaz-MoreiraUniversidade Católica Portuguesa. CBQF - Centro de Biotecnologia e Química Fina - Laboratório Associado. Escola Superior de Biotecnologia, Rua Diogo Botelho 1327, 4169-005, Porto, Portugal.ORCID http://orcid.org/0000-0001-8912-9836
Javier TamamesCentro Nacional de Biotecnología. Consejo Superior de Investigaciones Científicas (CSIC), Cantoblanco, Madrid, USA.
Célia M ManaiaUniversidade Católica Portuguesa. CBQF - Centro de Biotecnologia e Química Fina - Laboratório Associado. Escola Superior de Biotecnologia, Rua Diogo Botelho 1327, 4169-005, Porto, Portugal.
José Luis MartínezCentro Nacional de Biotecnología. Consejo Superior de Investigaciones Científicas (CSIC), Cantoblanco, Madrid, USA. jlmtnez@cnb.csic.es.ORCID http://orcid.org/0000-0001-8813-7607
Universidade Católica Portuguesa · PTCentro Nacional de Biotecnología · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Determining the effect of wastewater treatment in water resistome is a topic of interest for water quality, mainly under re-use and One-Health perspectives. The resistome, the plasmidome, and the bacterial community composition of samples from influents and treated effluents from a wastewater treatment plant located in Northern Portugal were studied using metagenomic techniques. Wastewater treatment contributed to reduce the abundance of resistance genes and of plasmid replicons, coinciding with a decline in the number of intrinsic resistance genes from Enterobacteriaceae, as well as with a reduction in the relative abundance of Firmicutes and Proteobacteria after treatment. These taxons comprise bacterial pathogens, including those belonging to the ESKAPE group, which encompasses bacteria with the highest risk of acquiring antibiotic resistance, being the most relevant hosts of resistance genes acquired through horizontal gene transfer. Our results support that wastewater treatment efficiently removes the hosts of antibiotic resistance genes and, consequently, the harboured antibiotic resistance genes. Principal component analysis indicates that the resistome and the bacterial composition clustered together in influent samples, while did not cluster in final effluent samples. Our results suggest that wastewater treatment mitigates the environmental dissemination of urban resistome, through the removal of the hosts harbouring mobile resistance genes.

Identifiers

PMID32424207
PMCPMC7235214
OpenAlexW3024085491

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.